Protein–RNA interactions for Protein: Q96GQ7

DDX27, Probable ATP-dependent RNA helicase DDX27, humanhuman

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX27Q96GQ7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX27Q96GQ7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.2■■■□□ 2.1
DDX27Q96GQ7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
DDX27Q96GQ7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX27Q96GQ7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
DDX27Q96GQ7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.17■■■□□ 2.1
DDX27Q96GQ7 DUX4L11-201ENST00000611504 1267 ntBASIC28.17■■■□□ 2.1
DDX27Q96GQ7 DUX4L12-201ENST00000614593 1267 ntBASIC28.17■■■□□ 2.1
DDX27Q96GQ7 DUX4L14-201ENST00000621227 1267 ntBASIC28.17■■■□□ 2.1
DDX27Q96GQ7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
DDX27Q96GQ7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
DDX27Q96GQ7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.16■■■□□ 2.1
DDX27Q96GQ7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX27Q96GQ7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DDX27Q96GQ7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX27Q96GQ7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX27Q96GQ7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX27Q96GQ7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.14■■■□□ 2.1
DDX27Q96GQ7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX27Q96GQ7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.13■■■□□ 2.09
DDX27Q96GQ7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.13■■■□□ 2.09
DDX27Q96GQ7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.13■■■□□ 2.09
DDX27Q96GQ7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
DDX27Q96GQ7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.11■■■□□ 2.09
DDX27Q96GQ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.11■■■□□ 2.09
DDX27Q96GQ7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.11■■■□□ 2.09
DDX27Q96GQ7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
DDX27Q96GQ7 AL135925.1-201ENST00000605920 1701 ntBASIC28.1■■■□□ 2.09
DDX27Q96GQ7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DDX27Q96GQ7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
DDX27Q96GQ7 MIR3648-2-201ENST00000581792 180 ntBASIC28.1■■■□□ 2.09
DDX27Q96GQ7 MIR3648-1-201ENST00000615959 180 ntBASIC28.1■■■□□ 2.09
DDX27Q96GQ7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.09■■■□□ 2.09
DDX27Q96GQ7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.09■■■□□ 2.09
DDX27Q96GQ7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
DDX27Q96GQ7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.08■■■□□ 2.09
DDX27Q96GQ7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
DDX27Q96GQ7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.08■■■□□ 2.09
DDX27Q96GQ7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX27Q96GQ7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
DDX27Q96GQ7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX27Q96GQ7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
DDX27Q96GQ7 ABCB10P3-201ENST00000561950 2166 ntBASIC28.06■■■□□ 2.08
DDX27Q96GQ7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
DDX27Q96GQ7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX27Q96GQ7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX27Q96GQ7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX27Q96GQ7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX27Q96GQ7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
DDX27Q96GQ7 MIR639-201ENST00000384974 98 ntBASIC28.05■■■□□ 2.08
DDX27Q96GQ7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.05■■■□□ 2.08
DDX27Q96GQ7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX27Q96GQ7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
DDX27Q96GQ7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX27Q96GQ7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX27Q96GQ7 LINC00273-201ENST00000539813 1452 ntBASIC28.03■■■□□ 2.08
DDX27Q96GQ7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
DDX27Q96GQ7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
DDX27Q96GQ7 AC016575.1-201ENST00000607026 382 ntBASIC28.03■■■□□ 2.08
DDX27Q96GQ7 ST7-AS1-201ENST00000456775 1889 ntBASIC28.03■■■□□ 2.08
DDX27Q96GQ7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
DDX27Q96GQ7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.03■■■□□ 2.08
DDX27Q96GQ7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.02■■■□□ 2.08
DDX27Q96GQ7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.02■■■□□ 2.08
DDX27Q96GQ7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX27Q96GQ7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.02■■■□□ 2.08
DDX27Q96GQ7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.02■■■□□ 2.08
DDX27Q96GQ7 CR559946.2-201ENST00000623684 991 ntBASIC28.02■■■□□ 2.08
DDX27Q96GQ7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
DDX27Q96GQ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L13-201ENST00000554103 1267 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L15-201ENST00000611059 1267 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L23-201ENST00000615195 1269 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L24-201ENST00000617576 1269 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L22-201ENST00000618238 1269 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L20-201ENST00000619712 1269 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L21-201ENST00000622058 1269 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L10-201ENST00000622460 1267 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 DUX4L25-201ENST00000624915 1269 ntBASIC28.01■■■□□ 2.07
DDX27Q96GQ7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
DDX27Q96GQ7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
DDX27Q96GQ7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.01■■■□□ 2.07
DDX27Q96GQ7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28■■■□□ 2.07
DDX27Q96GQ7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28■■■□□ 2.07
DDX27Q96GQ7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
DDX27Q96GQ7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX27Q96GQ7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX27Q96GQ7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX27Q96GQ7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX27Q96GQ7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX27Q96GQ7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.97■■■□□ 2.07
DDX27Q96GQ7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.97■■■□□ 2.07
DDX27Q96GQ7 MIR4449-201ENST00000578365 66 ntBASIC27.96■■■□□ 2.07
DDX27Q96GQ7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
DDX27Q96GQ7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
DDX27Q96GQ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
DDX27Q96GQ7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
DDX27Q96GQ7 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.95■■■□□ 2.06
DDX27Q96GQ7 AC127502.1-201ENST00000399971 1502 ntBASIC27.95■■■□□ 2.06
DDX27Q96GQ7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms