Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ATP6V0A1Q93050 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ATP6V0A1Q93050 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ATP6V0A1Q93050 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.24■■■□□ 2.27
ATP6V0A1Q93050 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
ATP6V0A1Q93050 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
ATP6V0A1Q93050 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ATP6V0A1Q93050 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A1Q93050 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.22■■■□□ 2.27
ATP6V0A1Q93050 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A1Q93050 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A1Q93050 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
ATP6V0A1Q93050 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
ATP6V0A1Q93050 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ATP6V0A1Q93050 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ATP6V0A1Q93050 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ATP6V0A1Q93050 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ATP6V0A1Q93050 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.19■■■□□ 2.26
ATP6V0A1Q93050 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
ATP6V0A1Q93050 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ATP6V0A1Q93050 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.19■■■□□ 2.26
ATP6V0A1Q93050 DUX4L13-201ENST00000554103 1267 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L15-201ENST00000611059 1267 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L23-201ENST00000615195 1269 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L24-201ENST00000617576 1269 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L22-201ENST00000618238 1269 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L20-201ENST00000619712 1269 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L21-201ENST00000622058 1269 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L10-201ENST00000622460 1267 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 DUX4L25-201ENST00000624915 1269 ntBASIC29.18■■■□□ 2.26
ATP6V0A1Q93050 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ATP6V0A1Q93050 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.17■■■□□ 2.26
ATP6V0A1Q93050 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
ATP6V0A1Q93050 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ATP6V0A1Q93050 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.15■■■□□ 2.26
ATP6V0A1Q93050 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.15■■■□□ 2.26
ATP6V0A1Q93050 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.14■■■□□ 2.26
ATP6V0A1Q93050 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
ATP6V0A1Q93050 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
ATP6V0A1Q93050 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
ATP6V0A1Q93050 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ATP6V0A1Q93050 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
ATP6V0A1Q93050 ST7-AS1-201ENST00000456775 1889 ntBASIC29.12■■■□□ 2.25
ATP6V0A1Q93050 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ATP6V0A1Q93050 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
ATP6V0A1Q93050 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
ATP6V0A1Q93050 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
ATP6V0A1Q93050 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ATP6V0A1Q93050 AC127502.1-201ENST00000399971 1502 ntBASIC29.11■■■□□ 2.25
ATP6V0A1Q93050 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
ATP6V0A1Q93050 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.11■■■□□ 2.25
ATP6V0A1Q93050 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
ATP6V0A1Q93050 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ATP6V0A1Q93050 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
ATP6V0A1Q93050 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
ATP6V0A1Q93050 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.1■■■□□ 2.25
ATP6V0A1Q93050 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
ATP6V0A1Q93050 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.09■■■□□ 2.25
ATP6V0A1Q93050 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.09■■■□□ 2.25
ATP6V0A1Q93050 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
ATP6V0A1Q93050 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.08■■■□□ 2.25
ATP6V0A1Q93050 LINC00273-201ENST00000539813 1452 ntBASIC29.08■■■□□ 2.25
ATP6V0A1Q93050 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
ATP6V0A1Q93050 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.07■■■□□ 2.24
ATP6V0A1Q93050 HSD17B1P1-201ENST00000590052 955 ntBASIC29.07■■■□□ 2.24
ATP6V0A1Q93050 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
ATP6V0A1Q93050 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ATP6V0A1Q93050 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ATP6V0A1Q93050 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
ATP6V0A1Q93050 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.05■■■□□ 2.24
ATP6V0A1Q93050 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.05■■■□□ 2.24
ATP6V0A1Q93050 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
ATP6V0A1Q93050 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
ATP6V0A1Q93050 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.04■■■□□ 2.24
ATP6V0A1Q93050 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
ATP6V0A1Q93050 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.03■■■□□ 2.24
ATP6V0A1Q93050 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
ATP6V0A1Q93050 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.02■■■□□ 2.24
ATP6V0A1Q93050 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.02■■■□□ 2.24
ATP6V0A1Q93050 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.02■■■□□ 2.24
ATP6V0A1Q93050 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.02■■■□□ 2.24
ATP6V0A1Q93050 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.02■■■□□ 2.24
ATP6V0A1Q93050 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
ATP6V0A1Q93050 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29■■■□□ 2.23
ATP6V0A1Q93050 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
ATP6V0A1Q93050 ABHD17AP3-201ENST00000503096 1137 ntBASIC29■■■□□ 2.23
ATP6V0A1Q93050 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
ATP6V0A1Q93050 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29■■■□□ 2.23
ATP6V0A1Q93050 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
ATP6V0A1Q93050 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ATP6V0A1Q93050 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ATP6V0A1Q93050 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
ATP6V0A1Q93050 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
ATP6V0A1Q93050 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.96■■■□□ 2.23
ATP6V0A1Q93050 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
ATP6V0A1Q93050 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
ATP6V0A1Q93050 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.95■■■□□ 2.22
ATP6V0A1Q93050 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
ATP6V0A1Q93050 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.94■■■□□ 2.22
ATP6V0A1Q93050 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms