Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF4Q8WZA2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF4Q8WZA2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF4Q8WZA2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF4Q8WZA2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC34.7■■■■□ 3.15
RAPGEF4Q8WZA2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF4Q8WZA2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF4Q8WZA2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC34.69■■■■□ 3.14
RAPGEF4Q8WZA2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
RAPGEF4Q8WZA2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.69■■■■□ 3.14
RAPGEF4Q8WZA2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
RAPGEF4Q8WZA2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
RAPGEF4Q8WZA2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC34.67■■■■□ 3.14
RAPGEF4Q8WZA2 AC010864.1-201ENST00000609407 1511 ntBASIC34.67■■■■□ 3.14
RAPGEF4Q8WZA2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.67■■■■□ 3.14
RAPGEF4Q8WZA2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
RAPGEF4Q8WZA2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.66■■■■□ 3.14
RAPGEF4Q8WZA2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC34.66■■■■□ 3.14
RAPGEF4Q8WZA2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
RAPGEF4Q8WZA2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC34.64■■■■□ 3.14
RAPGEF4Q8WZA2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RAPGEF4Q8WZA2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RAPGEF4Q8WZA2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
RAPGEF4Q8WZA2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RAPGEF4Q8WZA2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
RAPGEF4Q8WZA2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC34.61■■■■□ 3.13
RAPGEF4Q8WZA2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
RAPGEF4Q8WZA2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RAPGEF4Q8WZA2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
RAPGEF4Q8WZA2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC34.58■■■■□ 3.13
RAPGEF4Q8WZA2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
RAPGEF4Q8WZA2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
RAPGEF4Q8WZA2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC34.55■■■■□ 3.12
RAPGEF4Q8WZA2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC34.54■■■■□ 3.12
RAPGEF4Q8WZA2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC34.53■■■■□ 3.12
RAPGEF4Q8WZA2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
RAPGEF4Q8WZA2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
RAPGEF4Q8WZA2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
RAPGEF4Q8WZA2 RARRES2P2-201ENST00000394842 485 ntBASIC34.52■■■■□ 3.12
RAPGEF4Q8WZA2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
RAPGEF4Q8WZA2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC34.51■■■■□ 3.12
RAPGEF4Q8WZA2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
RAPGEF4Q8WZA2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
RAPGEF4Q8WZA2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.5■■■■□ 3.11
RAPGEF4Q8WZA2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
RAPGEF4Q8WZA2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
RAPGEF4Q8WZA2 GPX1-201ENST00000419349 1106 ntBASIC34.49■■■■□ 3.11
RAPGEF4Q8WZA2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
RAPGEF4Q8WZA2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
RAPGEF4Q8WZA2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
RAPGEF4Q8WZA2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
RAPGEF4Q8WZA2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
RAPGEF4Q8WZA2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
RAPGEF4Q8WZA2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
RAPGEF4Q8WZA2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
RAPGEF4Q8WZA2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC34.45■■■■□ 3.11
RAPGEF4Q8WZA2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
RAPGEF4Q8WZA2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC34.43■■■■□ 3.1
RAPGEF4Q8WZA2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC34.43■■■■□ 3.1
RAPGEF4Q8WZA2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC34.43■■■■□ 3.1
RAPGEF4Q8WZA2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
RAPGEF4Q8WZA2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
RAPGEF4Q8WZA2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
RAPGEF4Q8WZA2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC34.41■■■■□ 3.1
RAPGEF4Q8WZA2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.41■■■■□ 3.1
RAPGEF4Q8WZA2 ABHD17AP5-201ENST00000580133 923 ntBASIC34.4■■■■□ 3.1
RAPGEF4Q8WZA2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
RAPGEF4Q8WZA2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
RAPGEF4Q8WZA2 RNF126P1-201ENST00000567452 1320 ntBASIC34.39■■■■□ 3.1
RAPGEF4Q8WZA2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
RAPGEF4Q8WZA2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.38■■■■□ 3.09
RAPGEF4Q8WZA2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC34.38■■■■□ 3.09
RAPGEF4Q8WZA2 AC127502.1-201ENST00000399971 1502 ntBASIC34.37■■■■□ 3.09
RAPGEF4Q8WZA2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
RAPGEF4Q8WZA2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
RAPGEF4Q8WZA2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC34.35■■■■□ 3.09
RAPGEF4Q8WZA2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
RAPGEF4Q8WZA2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
RAPGEF4Q8WZA2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
RAPGEF4Q8WZA2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC34.32■■■■□ 3.08
RAPGEF4Q8WZA2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
RAPGEF4Q8WZA2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
RAPGEF4Q8WZA2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC34.31■■■■□ 3.08
RAPGEF4Q8WZA2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
RAPGEF4Q8WZA2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC34.31■■■■□ 3.08
RAPGEF4Q8WZA2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
RAPGEF4Q8WZA2 AC008813.1-201ENST00000536597 885 ntBASIC34.3■■■■□ 3.08
RAPGEF4Q8WZA2 AC135983.2-203ENST00000454486 1613 ntBASIC34.3■■■■□ 3.08
RAPGEF4Q8WZA2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RAPGEF4Q8WZA2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC34.29■■■■□ 3.08
RAPGEF4Q8WZA2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC34.29■■■■□ 3.08
RAPGEF4Q8WZA2 WHAMMP2-203ENST00000563942 1603 ntBASIC34.29■■■■□ 3.08
RAPGEF4Q8WZA2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RAPGEF4Q8WZA2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.28■■■■□ 3.08
RAPGEF4Q8WZA2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
RAPGEF4Q8WZA2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
RAPGEF4Q8WZA2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
RAPGEF4Q8WZA2 AC022413.1-201ENST00000624602 984 ntBASIC34.26■■■■□ 3.08
RAPGEF4Q8WZA2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC34.25■■■■□ 3.07
RAPGEF4Q8WZA2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms