Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TRUB1Q8WWH5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRUB1Q8WWH5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.69■■□□□ 1.38
TRUB1Q8WWH5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
TRUB1Q8WWH5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRUB1Q8WWH5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.68■■□□□ 1.38
TRUB1Q8WWH5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 WASH5P-204ENST00000632292 975 ntBASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRUB1Q8WWH5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRUB1Q8WWH5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRUB1Q8WWH5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.62■■□□□ 1.37
TRUB1Q8WWH5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRUB1Q8WWH5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
TRUB1Q8WWH5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRUB1Q8WWH5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRUB1Q8WWH5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.61■■□□□ 1.37
TRUB1Q8WWH5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRUB1Q8WWH5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRUB1Q8WWH5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRUB1Q8WWH5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRUB1Q8WWH5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.57■■□□□ 1.36
TRUB1Q8WWH5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 AC010864.1-201ENST00000609407 1511 ntBASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRUB1Q8WWH5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRUB1Q8WWH5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 BX255925.1-201ENST00000566954 1854 ntBASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 AP002365.1-201ENST00000603448 772 ntBASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 AL449106.1-201ENST00000608517 1980 ntBASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 AP004833.2-201ENST00000532228 1454 ntBASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms