Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TRUB1Q8WWH5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRUB1Q8WWH5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.69■■□□□ 1.38
TRUB1Q8WWH5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
TRUB1Q8WWH5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRUB1Q8WWH5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.68■■□□□ 1.38
TRUB1Q8WWH5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TRUB1Q8WWH5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 WASH5P-204ENST00000632292 975 ntBASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.65■■□□□ 1.38
TRUB1Q8WWH5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRUB1Q8WWH5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRUB1Q8WWH5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRUB1Q8WWH5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.62■■□□□ 1.37
TRUB1Q8WWH5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRUB1Q8WWH5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
TRUB1Q8WWH5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRUB1Q8WWH5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRUB1Q8WWH5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.61■■□□□ 1.37
TRUB1Q8WWH5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRUB1Q8WWH5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRUB1Q8WWH5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRUB1Q8WWH5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRUB1Q8WWH5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRUB1Q8WWH5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.57■■□□□ 1.36
TRUB1Q8WWH5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRUB1Q8WWH5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRUB1Q8WWH5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 AC010864.1-201ENST00000609407 1511 ntBASIC23.54■■□□□ 1.36
TRUB1Q8WWH5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
TRUB1Q8WWH5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRUB1Q8WWH5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRUB1Q8WWH5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
TRUB1Q8WWH5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRUB1Q8WWH5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRUB1Q8WWH5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
TRUB1Q8WWH5 BX255925.1-201ENST00000566954 1854 ntBASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.47■■□□□ 1.35
TRUB1Q8WWH5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 AP002365.1-201ENST00000603448 772 ntBASIC23.46■■□□□ 1.35
TRUB1Q8WWH5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 AL449106.1-201ENST00000608517 1980 ntBASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
TRUB1Q8WWH5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 AP004833.2-201ENST00000532228 1454 ntBASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRUB1Q8WWH5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TRUB1Q8WWH5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms