Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PTCD2Q8WV60 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PTCD2Q8WV60 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PTCD2Q8WV60 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PTCD2Q8WV60 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.24■■□□□ 1.79
PTCD2Q8WV60 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.24■■□□□ 1.79
PTCD2Q8WV60 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.23■■□□□ 1.79
PTCD2Q8WV60 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PTCD2Q8WV60 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
PTCD2Q8WV60 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PTCD2Q8WV60 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PTCD2Q8WV60 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
PTCD2Q8WV60 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD2Q8WV60 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD2Q8WV60 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 MIR6090-201ENST00000622481 60 ntBASIC26.2■■□□□ 1.78
PTCD2Q8WV60 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD2Q8WV60 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD2Q8WV60 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
PTCD2Q8WV60 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PTCD2Q8WV60 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTCD2Q8WV60 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.16■■□□□ 1.78
PTCD2Q8WV60 ABHD17AP4-201ENST00000411545 909 ntBASIC26.16■■□□□ 1.78
PTCD2Q8WV60 AP004833.2-201ENST00000532228 1454 ntBASIC26.14■■□□□ 1.78
PTCD2Q8WV60 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD2Q8WV60 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD2Q8WV60 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.12■■□□□ 1.77
PTCD2Q8WV60 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD2Q8WV60 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD2Q8WV60 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PTCD2Q8WV60 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 AC127502.1-201ENST00000399971 1502 ntBASIC26.09■■□□□ 1.77
PTCD2Q8WV60 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.08■■□□□ 1.77
PTCD2Q8WV60 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 AC108673.1-201ENST00000510422 1159 ntBASIC26.07■■□□□ 1.76
PTCD2Q8WV60 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 AC142086.6-201ENST00000621154 1765 ntBASIC26.07■■□□□ 1.76
PTCD2Q8WV60 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.06■■□□□ 1.76
PTCD2Q8WV60 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD2Q8WV60 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 AC021231.2-201ENST00000594613 730 ntBASIC26.05■■□□□ 1.76
PTCD2Q8WV60 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD2Q8WV60 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.04■■□□□ 1.76
PTCD2Q8WV60 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
PTCD2Q8WV60 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.02■■□□□ 1.76
PTCD2Q8WV60 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.02■■□□□ 1.76
PTCD2Q8WV60 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PTCD2Q8WV60 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD2Q8WV60 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD2Q8WV60 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD2Q8WV60 MIR7108-201ENST00000614319 87 ntBASIC26.01■■□□□ 1.75
PTCD2Q8WV60 DRD5P2-201ENST00000421395 2012 ntBASIC26■■□□□ 1.75
PTCD2Q8WV60 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD2Q8WV60 DUX4L29-201ENST00000425409 679 ntBASIC26■■□□□ 1.75
PTCD2Q8WV60 ZNRF2P2-203ENST00000454624 420 ntBASIC26■■□□□ 1.75
PTCD2Q8WV60 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26■■□□□ 1.75
PTCD2Q8WV60 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD2Q8WV60 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26■■□□□ 1.75
PTCD2Q8WV60 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD2Q8WV60 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms