Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SPTSSBQ8NFR3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SPTSSBQ8NFR3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.37□□□□□ -0.11
SPTSSBQ8NFR3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 AC145285.7-201ENST00000614819 1539 ntBASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSBQ8NFR3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 ABCB10P1-201ENST00000614297 2181 ntBASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSBQ8NFR3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.27□□□□□ -0.12
SPTSSBQ8NFR3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSBQ8NFR3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SPTSSBQ8NFR3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.27□□□□□ -0.13
SPTSSBQ8NFR3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSBQ8NFR3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTSSBQ8NFR3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSBQ8NFR3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms