Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.21■■□□□ 1.63
RAB42Q8N4Z0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.21■■□□□ 1.63
RAB42Q8N4Z0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RAB42Q8N4Z0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.2■■□□□ 1.63
RAB42Q8N4Z0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.2■■□□□ 1.62
RAB42Q8N4Z0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.2■■□□□ 1.62
RAB42Q8N4Z0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.2■■□□□ 1.62
RAB42Q8N4Z0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RAB42Q8N4Z0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.19■■□□□ 1.62
RAB42Q8N4Z0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.18■■□□□ 1.62
RAB42Q8N4Z0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RAB42Q8N4Z0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RAB42Q8N4Z0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RAB42Q8N4Z0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RAB42Q8N4Z0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAB42Q8N4Z0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
RAB42Q8N4Z0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RAB42Q8N4Z0 AC021231.2-201ENST00000594613 730 ntBASIC25.16■■□□□ 1.62
RAB42Q8N4Z0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
RAB42Q8N4Z0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RAB42Q8N4Z0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RAB42Q8N4Z0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RAB42Q8N4Z0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RAB42Q8N4Z0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.14■■□□□ 1.62
RAB42Q8N4Z0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RAB42Q8N4Z0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.14■■□□□ 1.62
RAB42Q8N4Z0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RAB42Q8N4Z0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
RAB42Q8N4Z0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
RAB42Q8N4Z0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RAB42Q8N4Z0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
RAB42Q8N4Z0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
RAB42Q8N4Z0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAB42Q8N4Z0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RAB42Q8N4Z0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RAB42Q8N4Z0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.11■■□□□ 1.61
RAB42Q8N4Z0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
RAB42Q8N4Z0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RAB42Q8N4Z0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAB42Q8N4Z0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RAB42Q8N4Z0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RAB42Q8N4Z0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RAB42Q8N4Z0 LINC00273-201ENST00000539813 1452 ntBASIC25.09■■□□□ 1.61
RAB42Q8N4Z0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RAB42Q8N4Z0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RAB42Q8N4Z0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
RAB42Q8N4Z0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RAB42Q8N4Z0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.08■■□□□ 1.6
RAB42Q8N4Z0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.08■■□□□ 1.6
RAB42Q8N4Z0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RAB42Q8N4Z0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RAB42Q8N4Z0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.07■■□□□ 1.6
RAB42Q8N4Z0 AP004833.2-201ENST00000532228 1454 ntBASIC25.07■■□□□ 1.6
RAB42Q8N4Z0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAB42Q8N4Z0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
RAB42Q8N4Z0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.06■■□□□ 1.6
RAB42Q8N4Z0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.06■■□□□ 1.6
RAB42Q8N4Z0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.06■■□□□ 1.6
RAB42Q8N4Z0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
RAB42Q8N4Z0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAB42Q8N4Z0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAB42Q8N4Z0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.05■■□□□ 1.6
RAB42Q8N4Z0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RAB42Q8N4Z0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RAB42Q8N4Z0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RAB42Q8N4Z0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RAB42Q8N4Z0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.03■■□□□ 1.6
RAB42Q8N4Z0 ABHD17AP4-201ENST00000411545 909 ntBASIC25.03■■□□□ 1.6
RAB42Q8N4Z0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAB42Q8N4Z0 AL139393.2-201ENST00000608721 2025 ntBASIC25.02■■□□□ 1.6
RAB42Q8N4Z0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.02■■□□□ 1.6
RAB42Q8N4Z0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RAB42Q8N4Z0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
RAB42Q8N4Z0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.01■■□□□ 1.59
RAB42Q8N4Z0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RAB42Q8N4Z0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.01■■□□□ 1.59
RAB42Q8N4Z0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25■■□□□ 1.59
RAB42Q8N4Z0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
RAB42Q8N4Z0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.99■■□□□ 1.59
RAB42Q8N4Z0 ZNRF2P2-203ENST00000454624 420 ntBASIC24.99■■□□□ 1.59
RAB42Q8N4Z0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.98■■□□□ 1.59
RAB42Q8N4Z0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RAB42Q8N4Z0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAB42Q8N4Z0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RAB42Q8N4Z0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAB42Q8N4Z0 AC135983.2-203ENST00000454486 1613 ntBASIC24.97■■□□□ 1.59
RAB42Q8N4Z0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.96■■□□□ 1.59
RAB42Q8N4Z0 ABCB10P3-201ENST00000561950 2166 ntBASIC24.96■■□□□ 1.59
RAB42Q8N4Z0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.96■■□□□ 1.59
RAB42Q8N4Z0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
RAB42Q8N4Z0 LINC01971-201ENST00000617888 1048 ntBASIC24.96■■□□□ 1.59
RAB42Q8N4Z0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms