Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ARHGEF39Q8N4T4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ARHGEF39Q8N4T4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ARHGEF39Q8N4T4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
ARHGEF39Q8N4T4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF39Q8N4T4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF39Q8N4T4 ABCB10P1-201ENST00000614297 2181 ntBASIC24.69■■□□□ 1.54
ARHGEF39Q8N4T4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARHGEF39Q8N4T4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.68■■□□□ 1.54
ARHGEF39Q8N4T4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.68■■□□□ 1.54
ARHGEF39Q8N4T4 LINC00273-201ENST00000539813 1452 ntBASIC24.68■■□□□ 1.54
ARHGEF39Q8N4T4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARHGEF39Q8N4T4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ARHGEF39Q8N4T4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ARHGEF39Q8N4T4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ARHGEF39Q8N4T4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.66■■□□□ 1.54
ARHGEF39Q8N4T4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.65■■□□□ 1.54
ARHGEF39Q8N4T4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
ARHGEF39Q8N4T4 MIR7108-201ENST00000614319 87 ntBASIC24.64■■□□□ 1.54
ARHGEF39Q8N4T4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ARHGEF39Q8N4T4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ARHGEF39Q8N4T4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
ARHGEF39Q8N4T4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
ARHGEF39Q8N4T4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
ARHGEF39Q8N4T4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.62■■□□□ 1.53
ARHGEF39Q8N4T4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ARHGEF39Q8N4T4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ARHGEF39Q8N4T4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
ARHGEF39Q8N4T4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.61■■□□□ 1.53
ARHGEF39Q8N4T4 LINC01971-201ENST00000617888 1048 ntBASIC24.61■■□□□ 1.53
ARHGEF39Q8N4T4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.61■■□□□ 1.53
ARHGEF39Q8N4T4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.61■■□□□ 1.53
ARHGEF39Q8N4T4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ARHGEF39Q8N4T4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ARHGEF39Q8N4T4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ARHGEF39Q8N4T4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ARHGEF39Q8N4T4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
ARHGEF39Q8N4T4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.59■■□□□ 1.53
ARHGEF39Q8N4T4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ARHGEF39Q8N4T4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.59■■□□□ 1.53
ARHGEF39Q8N4T4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
ARHGEF39Q8N4T4 AC135983.2-203ENST00000454486 1613 ntBASIC24.58■■□□□ 1.53
ARHGEF39Q8N4T4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ARHGEF39Q8N4T4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
ARHGEF39Q8N4T4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ARHGEF39Q8N4T4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
ARHGEF39Q8N4T4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ARHGEF39Q8N4T4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ARHGEF39Q8N4T4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
ARHGEF39Q8N4T4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ARHGEF39Q8N4T4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ARHGEF39Q8N4T4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.55■■□□□ 1.52
ARHGEF39Q8N4T4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ARHGEF39Q8N4T4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
ARHGEF39Q8N4T4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
ARHGEF39Q8N4T4 WHAMMP2-203ENST00000563942 1603 ntBASIC24.53■■□□□ 1.52
ARHGEF39Q8N4T4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF39Q8N4T4 DUX4L11-201ENST00000611504 1267 ntBASIC24.53■■□□□ 1.52
ARHGEF39Q8N4T4 DUX4L12-201ENST00000614593 1267 ntBASIC24.53■■□□□ 1.52
ARHGEF39Q8N4T4 DUX4L14-201ENST00000621227 1267 ntBASIC24.53■■□□□ 1.52
ARHGEF39Q8N4T4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF39Q8N4T4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.52■■□□□ 1.52
ARHGEF39Q8N4T4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.52■■□□□ 1.52
ARHGEF39Q8N4T4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF39Q8N4T4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF39Q8N4T4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
ARHGEF39Q8N4T4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF39Q8N4T4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF39Q8N4T4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
ARHGEF39Q8N4T4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF39Q8N4T4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF39Q8N4T4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF39Q8N4T4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF39Q8N4T4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ARHGEF39Q8N4T4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.5■■□□□ 1.51
ARHGEF39Q8N4T4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.5■■□□□ 1.51
ARHGEF39Q8N4T4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.49■■□□□ 1.51
ARHGEF39Q8N4T4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.49■■□□□ 1.51
ARHGEF39Q8N4T4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF39Q8N4T4 AL139393.2-201ENST00000608721 2025 ntBASIC24.49■■□□□ 1.51
ARHGEF39Q8N4T4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF39Q8N4T4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF39Q8N4T4 AP004833.2-201ENST00000532228 1454 ntBASIC24.47■■□□□ 1.51
ARHGEF39Q8N4T4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
ARHGEF39Q8N4T4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.47■■□□□ 1.51
ARHGEF39Q8N4T4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.47■■□□□ 1.51
ARHGEF39Q8N4T4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF39Q8N4T4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.46■■□□□ 1.51
ARHGEF39Q8N4T4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
ARHGEF39Q8N4T4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L13-201ENST00000554103 1267 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L15-201ENST00000611059 1267 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L23-201ENST00000615195 1269 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L24-201ENST00000617576 1269 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L22-201ENST00000618238 1269 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L20-201ENST00000619712 1269 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L21-201ENST00000622058 1269 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L10-201ENST00000622460 1267 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 DUX4L25-201ENST00000624915 1269 ntBASIC24.45■■□□□ 1.5
ARHGEF39Q8N4T4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms