Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SYNPOQ8N3V7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.66■■□□□ 1.86
SYNPOQ8N3V7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SYNPOQ8N3V7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYNPOQ8N3V7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYNPOQ8N3V7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.65■■□□□ 1.86
SYNPOQ8N3V7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SYNPOQ8N3V7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SYNPOQ8N3V7 LINC00273-201ENST00000539813 1452 ntBASIC26.64■■□□□ 1.86
SYNPOQ8N3V7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SYNPOQ8N3V7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.64■■□□□ 1.85
SYNPOQ8N3V7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SYNPOQ8N3V7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SYNPOQ8N3V7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SYNPOQ8N3V7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYNPOQ8N3V7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
SYNPOQ8N3V7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.63■■□□□ 1.85
SYNPOQ8N3V7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.62■■□□□ 1.85
SYNPOQ8N3V7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.62■■□□□ 1.85
SYNPOQ8N3V7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.61■■□□□ 1.85
SYNPOQ8N3V7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SYNPOQ8N3V7 ABHD17AP5-201ENST00000580133 923 ntBASIC26.61■■□□□ 1.85
SYNPOQ8N3V7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.61■■□□□ 1.85
SYNPOQ8N3V7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.6■■□□□ 1.85
SYNPOQ8N3V7 GPX1-201ENST00000419349 1106 ntBASIC26.6■■□□□ 1.85
SYNPOQ8N3V7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SYNPOQ8N3V7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SYNPOQ8N3V7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SYNPOQ8N3V7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.59■■□□□ 1.85
SYNPOQ8N3V7 RNF126P1-201ENST00000567452 1320 ntBASIC26.59■■□□□ 1.85
SYNPOQ8N3V7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SYNPOQ8N3V7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.58■■□□□ 1.85
SYNPOQ8N3V7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SYNPOQ8N3V7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SYNPOQ8N3V7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SYNPOQ8N3V7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.56■■□□□ 1.84
SYNPOQ8N3V7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SYNPOQ8N3V7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
SYNPOQ8N3V7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SYNPOQ8N3V7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
SYNPOQ8N3V7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SYNPOQ8N3V7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SYNPOQ8N3V7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SYNPOQ8N3V7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SYNPOQ8N3V7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SYNPOQ8N3V7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SYNPOQ8N3V7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SYNPOQ8N3V7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SYNPOQ8N3V7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
SYNPOQ8N3V7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYNPOQ8N3V7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYNPOQ8N3V7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
SYNPOQ8N3V7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SYNPOQ8N3V7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SYNPOQ8N3V7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SYNPOQ8N3V7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SYNPOQ8N3V7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SYNPOQ8N3V7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.51■■□□□ 1.83
SYNPOQ8N3V7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SYNPOQ8N3V7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.5■■□□□ 1.83
SYNPOQ8N3V7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
SYNPOQ8N3V7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SYNPOQ8N3V7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SYNPOQ8N3V7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SYNPOQ8N3V7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
SYNPOQ8N3V7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SYNPOQ8N3V7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SYNPOQ8N3V7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.47■■□□□ 1.83
SYNPOQ8N3V7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SYNPOQ8N3V7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SYNPOQ8N3V7 AL161658.1-201ENST00000623641 1967 ntBASIC26.46■■□□□ 1.83
SYNPOQ8N3V7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SYNPOQ8N3V7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.45■■□□□ 1.82
SYNPOQ8N3V7 AC008813.1-201ENST00000536597 885 ntBASIC26.45■■□□□ 1.82
SYNPOQ8N3V7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SYNPOQ8N3V7 AC010864.1-201ENST00000609407 1511 ntBASIC26.44■■□□□ 1.82
SYNPOQ8N3V7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.44■■□□□ 1.82
SYNPOQ8N3V7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.44■■□□□ 1.82
SYNPOQ8N3V7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SYNPOQ8N3V7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.44■■□□□ 1.82
SYNPOQ8N3V7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SYNPOQ8N3V7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SYNPOQ8N3V7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SYNPOQ8N3V7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SYNPOQ8N3V7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
SYNPOQ8N3V7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SYNPOQ8N3V7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SYNPOQ8N3V7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SYNPOQ8N3V7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
SYNPOQ8N3V7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
SYNPOQ8N3V7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SYNPOQ8N3V7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
SYNPOQ8N3V7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SYNPOQ8N3V7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SYNPOQ8N3V7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SYNPOQ8N3V7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SYNPOQ8N3V7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.39■■□□□ 1.82
SYNPOQ8N3V7 AC022413.1-201ENST00000624602 984 ntBASIC26.39■■□□□ 1.82
SYNPOQ8N3V7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
SYNPOQ8N3V7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms