Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VPS13BQ7Z7G8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13BQ7Z7G8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13BQ7Z7G8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VPS13BQ7Z7G8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13BQ7Z7G8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS13BQ7Z7G8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 AL033527.3-201ENST00000566366 1196 ntBASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 AL161658.1-201ENST00000623641 1967 ntBASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13BQ7Z7G8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS13BQ7Z7G8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS13BQ7Z7G8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC16.27■□□□□ 0.19
VPS13BQ7Z7G8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC16.27■□□□□ 0.19
VPS13BQ7Z7G8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VPS13BQ7Z7G8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13BQ7Z7G8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13BQ7Z7G8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS13BQ7Z7G8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 AC120057.4-201ENST00000624722 1615 ntBASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS13BQ7Z7G8 LINC00273-201ENST00000539813 1452 ntBASIC16.22■□□□□ 0.19
VPS13BQ7Z7G8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 AC012354.3-201ENST00000623734 483 ntBASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS13BQ7Z7G8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 TSPY13P-201ENST00000338964 914 ntBASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 AC018358.1-201ENST00000631079 1402 ntBASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS13BQ7Z7G8 AC008813.1-201ENST00000536597 885 ntBASIC16.17■□□□□ 0.18
VPS13BQ7Z7G8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS13BQ7Z7G8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 RARRES2P1-201ENST00000474487 481 ntBASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 AC022413.1-201ENST00000624602 984 ntBASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS13BQ7Z7G8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VPS13BQ7Z7G8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms