Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.16■■■□□ 2.42
KRT40Q6A162 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KRT40Q6A162 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KRT40Q6A162 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
KRT40Q6A162 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
KRT40Q6A162 DUX4L28-201ENST00000623687 678 ntBASIC30.14■■■□□ 2.42
KRT40Q6A162 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.13■■■□□ 2.41
KRT40Q6A162 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.13■■■□□ 2.41
KRT40Q6A162 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
KRT40Q6A162 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
KRT40Q6A162 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.13■■■□□ 2.41
KRT40Q6A162 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
KRT40Q6A162 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KRT40Q6A162 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.12■■■□□ 2.41
KRT40Q6A162 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.12■■■□□ 2.41
KRT40Q6A162 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
KRT40Q6A162 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
KRT40Q6A162 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KRT40Q6A162 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
KRT40Q6A162 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
KRT40Q6A162 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.09■■■□□ 2.41
KRT40Q6A162 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.08■■■□□ 2.41
KRT40Q6A162 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.07■■■□□ 2.4
KRT40Q6A162 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.07■■■□□ 2.4
KRT40Q6A162 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.06■■■□□ 2.4
KRT40Q6A162 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
KRT40Q6A162 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
KRT40Q6A162 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.04■■■□□ 2.4
KRT40Q6A162 AC127502.1-201ENST00000399971 1502 ntBASIC30.03■■■□□ 2.4
KRT40Q6A162 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.03■■■□□ 2.4
KRT40Q6A162 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
KRT40Q6A162 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
KRT40Q6A162 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
KRT40Q6A162 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
KRT40Q6A162 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.03■■■□□ 2.4
KRT40Q6A162 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.02■■■□□ 2.4
KRT40Q6A162 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.01■■■□□ 2.39
KRT40Q6A162 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
KRT40Q6A162 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
KRT40Q6A162 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30■■■□□ 2.39
KRT40Q6A162 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30■■■□□ 2.39
KRT40Q6A162 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30■■■□□ 2.39
KRT40Q6A162 AC044849.2-201ENST00000606596 710 ntBASIC29.98■■■□□ 2.39
KRT40Q6A162 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
KRT40Q6A162 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
KRT40Q6A162 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
KRT40Q6A162 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.97■■■□□ 2.39
KRT40Q6A162 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.97■■■□□ 2.39
KRT40Q6A162 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
KRT40Q6A162 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
KRT40Q6A162 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
KRT40Q6A162 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
KRT40Q6A162 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
KRT40Q6A162 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
KRT40Q6A162 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
KRT40Q6A162 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
KRT40Q6A162 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
KRT40Q6A162 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
KRT40Q6A162 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
KRT40Q6A162 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
KRT40Q6A162 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
KRT40Q6A162 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.92■■■□□ 2.38
KRT40Q6A162 MIR6090-201ENST00000622481 60 ntBASIC29.91■■■□□ 2.38
KRT40Q6A162 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
KRT40Q6A162 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
KRT40Q6A162 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
KRT40Q6A162 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
KRT40Q6A162 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
KRT40Q6A162 ZNRF2P2-203ENST00000454624 420 ntBASIC29.89■■■□□ 2.38
KRT40Q6A162 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.89■■■□□ 2.38
KRT40Q6A162 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
KRT40Q6A162 AC108673.1-201ENST00000510422 1159 ntBASIC29.88■■■□□ 2.37
KRT40Q6A162 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
KRT40Q6A162 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.87■■■□□ 2.37
KRT40Q6A162 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
KRT40Q6A162 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.86■■■□□ 2.37
KRT40Q6A162 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
KRT40Q6A162 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.86■■■□□ 2.37
KRT40Q6A162 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.86■■■□□ 2.37
KRT40Q6A162 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
KRT40Q6A162 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
KRT40Q6A162 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.85■■■□□ 2.37
KRT40Q6A162 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.85■■■□□ 2.37
KRT40Q6A162 AP004833.2-201ENST00000532228 1454 ntBASIC29.85■■■□□ 2.37
KRT40Q6A162 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.84■■■□□ 2.37
KRT40Q6A162 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.83■■■□□ 2.37
KRT40Q6A162 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.82■■■□□ 2.36
KRT40Q6A162 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
KRT40Q6A162 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
KRT40Q6A162 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.8■■■□□ 2.36
KRT40Q6A162 DRD5P2-201ENST00000421395 2012 ntBASIC29.8■■■□□ 2.36
KRT40Q6A162 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
KRT40Q6A162 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.8■■■□□ 2.36
KRT40Q6A162 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KRT40Q6A162 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
KRT40Q6A162 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
KRT40Q6A162 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.79■■■□□ 2.36
KRT40Q6A162 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
KRT40Q6A162 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
KRT40Q6A162 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms