Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBR4Q5T4S7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC14.92□□□□□ -0.02
UBR4Q5T4S7 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 WASH5P-204ENST00000632292 975 ntBASIC14.9□□□□□ -0.02
UBR4Q5T4S7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBR4Q5T4S7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBR4Q5T4S7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBR4Q5T4S7 AL356441.2-201ENST00000443009 864 ntBASIC14.89□□□□□ -0.03
UBR4Q5T4S7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBR4Q5T4S7 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.88□□□□□ -0.03
UBR4Q5T4S7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBR4Q5T4S7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBR4Q5T4S7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBR4Q5T4S7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBR4Q5T4S7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 MIR638-201ENST00000385237 100 ntBASIC14.86□□□□□ -0.03
UBR4Q5T4S7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
UBR4Q5T4S7 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 AC009299.2-201ENST00000482477 511 ntBASIC14.83□□□□□ -0.04
UBR4Q5T4S7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 ESRRAP2-201ENST00000418437 1549 ntBASIC14.8□□□□□ -0.04
UBR4Q5T4S7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 GUSBP5-201ENST00000418136 578 ntBASIC14.8□□□□□ -0.04
UBR4Q5T4S7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 RP9P-202ENST00000450133 1212 ntBASIC14.78□□□□□ -0.04
UBR4Q5T4S7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBR4Q5T4S7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.77□□□□□ -0.04
UBR4Q5T4S7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBR4Q5T4S7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBR4Q5T4S7 KRT8P33-201ENST00000508125 1423 ntBASIC14.76□□□□□ -0.05
UBR4Q5T4S7 AC008406.3-201ENST00000620001 1374 ntBASIC14.75□□□□□ -0.05
UBR4Q5T4S7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 RARRES2P6-201ENST00000567333 442 ntBASIC14.75□□□□□ -0.05
UBR4Q5T4S7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 DUX4L18-201ENST00000553347 1267 ntBASIC14.74□□□□□ -0.05
UBR4Q5T4S7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
UBR4Q5T4S7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC14.73□□□□□ -0.05
UBR4Q5T4S7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBR4Q5T4S7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBR4Q5T4S7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
UBR4Q5T4S7 AC129492.7-201ENST00000622992 756 ntBASIC14.72□□□□□ -0.05
UBR4Q5T4S7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.72□□□□□ -0.05
UBR4Q5T4S7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms