Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 LINC00273-201ENST00000539813 1452 ntBASIC30.79■■■□□ 2.52
CERKLQ49MI3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CERKLQ49MI3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CERKLQ49MI3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.77■■■□□ 2.52
CERKLQ49MI3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CERKLQ49MI3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CERKLQ49MI3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CERKLQ49MI3 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.75■■■□□ 2.51
CERKLQ49MI3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.75■■■□□ 2.51
CERKLQ49MI3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.75■■■□□ 2.51
CERKLQ49MI3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CERKLQ49MI3 AL135925.1-201ENST00000605920 1701 ntBASIC30.73■■■□□ 2.51
CERKLQ49MI3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
CERKLQ49MI3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CERKLQ49MI3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CERKLQ49MI3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CERKLQ49MI3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.71■■■□□ 2.51
CERKLQ49MI3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.71■■■□□ 2.51
CERKLQ49MI3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.71■■■□□ 2.51
CERKLQ49MI3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.69■■■□□ 2.5
CERKLQ49MI3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CERKLQ49MI3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CERKLQ49MI3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CERKLQ49MI3 AC127502.1-201ENST00000399971 1502 ntBASIC30.67■■■□□ 2.5
CERKLQ49MI3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.66■■■□□ 2.5
CERKLQ49MI3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CERKLQ49MI3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.66■■■□□ 2.5
CERKLQ49MI3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CERKLQ49MI3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CERKLQ49MI3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CERKLQ49MI3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.64■■■□□ 2.5
CERKLQ49MI3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
CERKLQ49MI3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.63■■■□□ 2.49
CERKLQ49MI3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CERKLQ49MI3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CERKLQ49MI3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CERKLQ49MI3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.61■■■□□ 2.49
CERKLQ49MI3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CERKLQ49MI3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CERKLQ49MI3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.58■■■□□ 2.49
CERKLQ49MI3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.56■■■□□ 2.48
CERKLQ49MI3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CERKLQ49MI3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CERKLQ49MI3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CERKLQ49MI3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CERKLQ49MI3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CERKLQ49MI3 HSD17B1P1-201ENST00000590052 955 ntBASIC30.53■■■□□ 2.48
CERKLQ49MI3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
CERKLQ49MI3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CERKLQ49MI3 AC135983.2-203ENST00000454486 1613 ntBASIC30.52■■■□□ 2.48
CERKLQ49MI3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.52■■■□□ 2.48
CERKLQ49MI3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.51■■■□□ 2.47
CERKLQ49MI3 WHAMMP2-203ENST00000563942 1603 ntBASIC30.51■■■□□ 2.47
CERKLQ49MI3 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.5■■■□□ 2.47
CERKLQ49MI3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CERKLQ49MI3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.49■■■□□ 2.47
CERKLQ49MI3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CERKLQ49MI3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.49■■■□□ 2.47
CERKLQ49MI3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
CERKLQ49MI3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
CERKLQ49MI3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
CERKLQ49MI3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.47■■■□□ 2.47
CERKLQ49MI3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CERKLQ49MI3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CERKLQ49MI3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
CERKLQ49MI3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.45■■■□□ 2.47
CERKLQ49MI3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
CERKLQ49MI3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
CERKLQ49MI3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.43■■■□□ 2.46
CERKLQ49MI3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.42■■■□□ 2.46
CERKLQ49MI3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CERKLQ49MI3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CERKLQ49MI3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CERKLQ49MI3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CERKLQ49MI3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
CERKLQ49MI3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CERKLQ49MI3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms