Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CFHR3Q02985 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CFHR3Q02985 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CFHR3Q02985 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CFHR3Q02985 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.35■□□□□ 0.85
CFHR3Q02985 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CFHR3Q02985 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
CFHR3Q02985 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CFHR3Q02985 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.34■□□□□ 0.85
CFHR3Q02985 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.34■□□□□ 0.85
CFHR3Q02985 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.34■□□□□ 0.85
CFHR3Q02985 LINC00273-201ENST00000539813 1452 ntBASIC20.34■□□□□ 0.85
CFHR3Q02985 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFHR3Q02985 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFHR3Q02985 MIR7108-201ENST00000614319 87 ntBASIC20.33■□□□□ 0.85
CFHR3Q02985 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.33■□□□□ 0.84
CFHR3Q02985 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CFHR3Q02985 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.32■□□□□ 0.84
CFHR3Q02985 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFHR3Q02985 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFHR3Q02985 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.3■□□□□ 0.84
CFHR3Q02985 LINC01971-201ENST00000617888 1048 ntBASIC20.3■□□□□ 0.84
CFHR3Q02985 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFHR3Q02985 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CFHR3Q02985 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.28■□□□□ 0.84
CFHR3Q02985 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CFHR3Q02985 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CFHR3Q02985 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFHR3Q02985 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFHR3Q02985 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CFHR3Q02985 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.27■□□□□ 0.83
CFHR3Q02985 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CFHR3Q02985 ABCB10P1-201ENST00000614297 2181 ntBASIC20.26■□□□□ 0.83
CFHR3Q02985 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR3Q02985 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR3Q02985 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR3Q02985 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CFHR3Q02985 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR3Q02985 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CFHR3Q02985 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.24■□□□□ 0.83
CFHR3Q02985 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.24■□□□□ 0.83
CFHR3Q02985 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFHR3Q02985 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFHR3Q02985 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFHR3Q02985 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CFHR3Q02985 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.23■□□□□ 0.83
CFHR3Q02985 DUX4L11-201ENST00000611504 1267 ntBASIC20.23■□□□□ 0.83
CFHR3Q02985 DUX4L12-201ENST00000614593 1267 ntBASIC20.23■□□□□ 0.83
CFHR3Q02985 DUX4L14-201ENST00000621227 1267 ntBASIC20.23■□□□□ 0.83
CFHR3Q02985 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFHR3Q02985 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CFHR3Q02985 AC135983.2-203ENST00000454486 1613 ntBASIC20.23■□□□□ 0.83
CFHR3Q02985 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.22■□□□□ 0.83
CFHR3Q02985 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.22■□□□□ 0.83
CFHR3Q02985 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR3Q02985 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR3Q02985 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR3Q02985 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.21■□□□□ 0.83
CFHR3Q02985 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.21■□□□□ 0.83
CFHR3Q02985 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFHR3Q02985 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR3Q02985 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CFHR3Q02985 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.2■□□□□ 0.82
CFHR3Q02985 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFHR3Q02985 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CFHR3Q02985 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.19■□□□□ 0.82
CFHR3Q02985 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CFHR3Q02985 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFHR3Q02985 WHAMMP2-203ENST00000563942 1603 ntBASIC20.19■□□□□ 0.82
CFHR3Q02985 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CFHR3Q02985 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFHR3Q02985 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.18■□□□□ 0.82
CFHR3Q02985 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.18■□□□□ 0.82
CFHR3Q02985 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFHR3Q02985 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.18■□□□□ 0.82
CFHR3Q02985 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CFHR3Q02985 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFHR3Q02985 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFHR3Q02985 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFHR3Q02985 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFHR3Q02985 AP004833.2-201ENST00000532228 1454 ntBASIC20.17■□□□□ 0.82
CFHR3Q02985 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CFHR3Q02985 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFHR3Q02985 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.16■□□□□ 0.82
CFHR3Q02985 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L13-201ENST00000554103 1267 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L15-201ENST00000611059 1267 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L23-201ENST00000615195 1269 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L24-201ENST00000617576 1269 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L22-201ENST00000618238 1269 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L20-201ENST00000619712 1269 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L21-201ENST00000622058 1269 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L10-201ENST00000622460 1267 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 DUX4L25-201ENST00000624915 1269 ntBASIC20.16■□□□□ 0.82
CFHR3Q02985 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CFHR3Q02985 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFHR3Q02985 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.15■□□□□ 0.82
CFHR3Q02985 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFHR3Q02985 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFHR3Q02985 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms