Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 LAS17YOR181W 1902 nt5.93□□□□□ -1.46
SMD1Q02260 YDR467CYDR467C 327 nt5.92□□□□□ -1.46
SMD1Q02260 CCT5YJR064W 1689 nt5.91□□□□□ -1.46
SMD1Q02260 SPS100YHR139C 981 nt5.91□□□□□ -1.46
SMD1Q02260 MET1YKR069W 1782 nt5.9□□□□□ -1.46
SMD1Q02260 NPP2YEL016C 1482 nt5.9□□□□□ -1.46
SMD1Q02260 YFR036W-AYFR036W-A 651 nt5.9□□□□□ -1.46
SMD1Q02260 SWT21YNL187W 1074 nt5.9□□□□□ -1.46
SMD1Q02260 CRC1YOR100C 984 nt5.89□□□□□ -1.47
SMD1Q02260 HBS1YKR084C 1836 nt5.89□□□□□ -1.47
SMD1Q02260 FET5YFL041W 1869 nt5.89□□□□□ -1.47
SMD1Q02260 GPM1YKL152C 744 nt5.88□□□□□ -1.47
SMD1Q02260 YBL095WYBL095W 813 nt5.88□□□□□ -1.47
SMD1Q02260 MIM1YOL026C 342 nt5.88□□□□□ -1.47
SMD1Q02260 YRF1-1YDR545W 5391 nt5.87□□□□□ -1.47
SMD1Q02260 YRF1-5YLR467W 5391 nt5.87□□□□□ -1.47
SMD1Q02260 YRF1-8YOR396W 5391 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)BtD(GUC)B 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)DtD(GUC)D 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)G1tD(GUC)G1 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)G2tD(GUC)G2 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)I1tD(GUC)I1 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)I2tD(GUC)I2 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)J1tD(GUC)J1 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)J2tD(GUC)J2 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)J3tD(GUC)J3 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)J4tD(GUC)J4 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)KtD(GUC)K 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)L1tD(GUC)L1 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)L2tD(GUC)L2 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)MtD(GUC)M 72 nt5.87□□□□□ -1.47
SMD1Q02260 tD(GUC)OtD(GUC)O 72 nt5.87□□□□□ -1.47
SMD1Q02260 MET8YBR213W 825 nt5.87□□□□□ -1.47
SMD1Q02260 GGA2YHR108W 1758 nt5.86□□□□□ -1.47
SMD1Q02260 AMF1YOR378W 1548 nt5.86□□□□□ -1.47
SMD1Q02260 MHF1YOL086W-A 273 nt5.86□□□□□ -1.47
SMD1Q02260 CTF3YLR381W 2202 nt5.86□□□□□ -1.47
SMD1Q02260 CMK2YOL016C 1344 nt5.85□□□□□ -1.47
SMD1Q02260 GGC1YDL198C 903 nt5.85□□□□□ -1.47
SMD1Q02260 SNZ1YMR096W 894 nt5.85□□□□□ -1.47
SMD1Q02260 YMR316C-BYMR316C-B 309 nt5.85□□□□□ -1.47
SMD1Q02260 CTI6YPL181W 1521 nt5.84□□□□□ -1.47
SMD1Q02260 SBP1YHL034C 885 nt5.84□□□□□ -1.47
SMD1Q02260 ABZ2YMR289W 1125 nt5.84□□□□□ -1.47
SMD1Q02260 KGD2YDR148C 1392 nt5.83□□□□□ -1.48
SMD1Q02260 THI3YDL080C 1830 nt5.83□□□□□ -1.48
SMD1Q02260 BAP3YDR046C 1815 nt5.83□□□□□ -1.48
SMD1Q02260 ORT1YOR130C 879 nt5.82□□□□□ -1.48
SMD1Q02260 YMC2YBR104W 990 nt5.82□□□□□ -1.48
SMD1Q02260 HXT11YOL156W 1704 nt5.82□□□□□ -1.48
SMD1Q02260 SMC5YOL034W 3282 nt5.82□□□□□ -1.48
SMD1Q02260 SAN1YDR143C 1833 nt5.81□□□□□ -1.48
SMD1Q02260 YIL108WYIL108W 2091 nt5.8□□□□□ -1.48
SMD1Q02260 YLR072WYLR072W 2082 nt5.8□□□□□ -1.48
SMD1Q02260 HEL1YKR017C 1656 nt5.8□□□□□ -1.48
SMD1Q02260 EMC3YKL207W 762 nt5.8□□□□□ -1.48
SMD1Q02260 AAC3YBR085W 924 nt5.8□□□□□ -1.48
SMD1Q02260 LEU2YCL018W 1095 nt5.8□□□□□ -1.48
SMD1Q02260 ENO2YHR174W 1314 nt5.79□□□□□ -1.48
SMD1Q02260 YJL195CYJL195C 702 nt5.79□□□□□ -1.48
SMD1Q02260 TRP2YER090W 1524 nt5.79□□□□□ -1.48
SMD1Q02260 MRS4YKR052C 915 nt5.78□□□□□ -1.48
SMD1Q02260 AFG2YLR397C 2343 nt5.78□□□□□ -1.48
SMD1Q02260 TAF13YML098W 504 nt5.78□□□□□ -1.48
SMD1Q02260 AAT1YKL106W 1356 nt5.78□□□□□ -1.48
SMD1Q02260 ECM27YJR106W 2178 nt5.77□□□□□ -1.49
SMD1Q02260 CKI1YLR133W 1749 nt5.77□□□□□ -1.49
SMD1Q02260 POT1YIL160C 1254 nt5.77□□□□□ -1.49
SMD1Q02260 YKL053WYKL053W 375 nt5.77□□□□□ -1.49
SMD1Q02260 YMR210WYMR210W 1350 nt5.77□□□□□ -1.49
SMD1Q02260 MSB3YNL293W 1902 nt5.76□□□□□ -1.49
SMD1Q02260 YEL008WYEL008W 381 nt5.76□□□□□ -1.49
SMD1Q02260 YPT11YNL304W 1254 nt5.76□□□□□ -1.49
SMD1Q02260 CRN1YLR429W 1956 nt5.76□□□□□ -1.49
SMD1Q02260 TMS1YDR105C 1422 nt5.75□□□□□ -1.49
SMD1Q02260 SRP54YPR088C 1626 nt5.75□□□□□ -1.49
SMD1Q02260 FUN14YAL008W 597 nt5.75□□□□□ -1.49
SMD1Q02260 GAS1YMR307W 1680 nt5.75□□□□□ -1.49
SMD1Q02260 PAB1YER165W 1734 nt5.74□□□□□ -1.49
SMD1Q02260 YCR061WYCR061W 1896 nt5.74□□□□□ -1.49
SMD1Q02260 DIA4YHR011W 1341 nt5.74□□□□□ -1.49
SMD1Q02260 FSH2YMR222C 672 nt5.73□□□□□ -1.49
SMD1Q02260 YIR035CYIR035C 765 nt5.72□□□□□ -1.49
SMD1Q02260 GSF2YML048W 1212 nt5.72□□□□□ -1.49
SMD1Q02260 ADH6YMR318C 1083 nt5.72□□□□□ -1.49
SMD1Q02260 ADE16YLR028C 1776 nt5.72□□□□□ -1.49
SMD1Q02260 HXT13YEL069C 1695 nt5.72□□□□□ -1.49
SMD1Q02260 TPC1YGR096W 945 nt5.71□□□□□ -1.5
SMD1Q02260 REX2YLR059C 810 nt5.71□□□□□ -1.5
SMD1Q02260 LEA1YPL213W 717 nt5.71□□□□□ -1.5
SMD1Q02260 SRM1YGL097W 1449 nt5.71□□□□□ -1.5
SMD1Q02260 NAM8YHR086W 1572 nt5.71□□□□□ -1.5
SMD1Q02260 snR86snR86 1004 nt5.7□□□□□ -1.5
SMD1Q02260 PTC6YCR079W 1329 nt5.7□□□□□ -1.5
SMD1Q02260 TUB4YLR212C 1422 nt5.68□□□□□ -1.5
SMD1Q02260 TOP3YLR234W 1971 nt5.68□□□□□ -1.5
SMD1Q02260 PAR32YDL173W 888 nt5.68□□□□□ -1.5
SMD1Q02260 ESS1YJR017C 513 nt5.68□□□□□ -1.5
SMD1Q02260 HIS3YOR202W 663 nt5.68□□□□□ -1.5
SMD1Q02260 DUS3YLR401C 2007 nt5.68□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 56.2 ms