Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 TIP1YBR067C 633 nt8.45□□□□□ -1.06
NPL3Q01560 YNL165WYNL165W 1221 nt8.44□□□□□ -1.06
NPL3Q01560 SPE2YOL052C 1191 nt8.44□□□□□ -1.06 RIP-Chip
NPL3Q01560 YRF1-2YER190W 5046 nt8.44□□□□□ -1.06
NPL3Q01560 ITR2YOL103W 1830 nt8.43□□□□□ -1.06
NPL3Q01560 IGD1YFR017C 588 nt8.43□□□□□ -1.06 RIP-Chip
NPL3Q01560 YIA6YIL006W 1122 nt8.43□□□□□ -1.06
NPL3Q01560 KEL3YPL263C 1956 nt8.42□□□□□ -1.06
NPL3Q01560 TPC1YGR096W 945 nt8.42□□□□□ -1.06
NPL3Q01560 PCP1YGR101W 1041 nt8.42□□□□□ -1.06
NPL3Q01560 YKL133CYKL133C 1392 nt8.42□□□□□ -1.06
NPL3Q01560 VMA11YPL234C 495 nt8.41□□□□□ -1.06
NPL3Q01560 POP2YNR052C 1302 nt8.4□□□□□ -1.06
NPL3Q01560 LSR1LSR1 1175 nt8.4□□□□□ -1.06
NPL3Q01560 MRS6YOR370C 1812 nt8.39□□□□□ -1.07
NPL3Q01560 SOD2YHR008C 702 nt8.39□□□□□ -1.07 RIP-Chip
NPL3Q01560 NAS2YIL007C 663 nt8.39□□□□□ -1.07
NPL3Q01560 LEU2YCL018W 1095 nt8.39□□□□□ -1.07
NPL3Q01560 YHR219WYHR219W 1875 nt8.38□□□□□ -1.07
NPL3Q01560 THP3YPR045C 1413 nt8.38□□□□□ -1.07
NPL3Q01560 snR31snR31 225 nt8.38□□□□□ -1.07
NPL3Q01560 YER152W-AYER152W-A 567 nt8.37□□□□□ -1.07
NPL3Q01560 RPN14YGL004C 1254 nt8.37□□□□□ -1.07
NPL3Q01560 FSH2YMR222C 672 nt8.37□□□□□ -1.07 RIP-Chip
NPL3Q01560 YMR265CYMR265C 1386 nt8.36□□□□□ -1.07 RIP-Chip
NPL3Q01560 RPD3YNL330C 1302 nt8.36□□□□□ -1.07
NPL3Q01560 MGM101YJR144W 810 nt8.36□□□□□ -1.07 RIP-Chip
NPL3Q01560 HAP5YOR358W 729 nt8.36□□□□□ -1.07
NPL3Q01560 AAC3YBR085W 924 nt8.36□□□□□ -1.07
NPL3Q01560 DTR1YBR180W 1719 nt8.36□□□□□ -1.07
NPL3Q01560 SWT21YNL187W 1074 nt8.35□□□□□ -1.07
NPL3Q01560 YHR218WYHR218W 1812 nt8.34□□□□□ -1.07
NPL3Q01560 CDD1YLR245C 429 nt8.34□□□□□ -1.07 RIP-Chip
NPL3Q01560 tA(AGC)DtA(AGC)D 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)FtA(AGC)F 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)GtA(AGC)G 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)HtA(AGC)H 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)JtA(AGC)J 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)K1tA(AGC)K1 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)K2tA(AGC)K2 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)LtA(AGC)L 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)M1tA(AGC)M1 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)M2tA(AGC)M2 73 nt8.33□□□□□ -1.08
NPL3Q01560 tA(AGC)PtA(AGC)P 73 nt8.33□□□□□ -1.08
NPL3Q01560 NAM8YHR086W 1572 nt8.33□□□□□ -1.08
NPL3Q01560 YJL211CYJL211C 444 nt8.33□□□□□ -1.08
NPL3Q01560 PAM17YKR065C 594 nt8.33□□□□□ -1.08
NPL3Q01560 SNX3YOR357C 489 nt8.33□□□□□ -1.08
NPL3Q01560 ODC1YPL134C 933 nt8.33□□□□□ -1.08
NPL3Q01560 SUV3YPL029W 2214 nt8.32□□□□□ -1.08
NPL3Q01560 YCR025CYCR025C 411 nt8.32□□□□□ -1.08
NPL3Q01560 IPL1YPL209C 1104 nt8.32□□□□□ -1.08
NPL3Q01560 MET1YKR069W 1782 nt8.32□□□□□ -1.08
NPL3Q01560 HDA1YNL021W 2121 nt8.32□□□□□ -1.08
NPL3Q01560 YKR012CYKR012C 378 nt8.31□□□□□ -1.08
NPL3Q01560 SWP1YMR149W 861 nt8.31□□□□□ -1.08 RIP-Chip
NPL3Q01560 ZAP1YJL056C 2643 nt8.31□□□□□ -1.08
NPL3Q01560 SFL1YOR140W 2301 nt8.3□□□□□ -1.08 RIP-Chip
NPL3Q01560 ADH3YMR083W 1128 nt8.3□□□□□ -1.08
NPL3Q01560 TOK1YJL093C 2076 nt8.3□□□□□ -1.08
NPL3Q01560 YCP4YCR004C 744 nt8.29□□□□□ -1.08
NPL3Q01560 MOB1YIL106W 945 nt8.29□□□□□ -1.08
NPL3Q01560 FLX1YIL134W 936 nt8.29□□□□□ -1.08
NPL3Q01560 CRC1YOR100C 984 nt8.29□□□□□ -1.08
NPL3Q01560 EEB1YPL095C 1371 nt8.29□□□□□ -1.08
NPL3Q01560 PHB2YGR231C 933 nt8.28□□□□□ -1.08
NPL3Q01560 YKL053WYKL053W 375 nt8.28□□□□□ -1.08
NPL3Q01560 REX2YLR059C 810 nt8.27□□□□□ -1.09 RIP-Chip
NPL3Q01560 YHR131CYHR131C 2553 nt8.27□□□□□ -1.09
NPL3Q01560 MEX67YPL169C 1800 nt8.26□□□□□ -1.09
NPL3Q01560 MDM35YKL053C-A 261 nt8.26□□□□□ -1.09
NPL3Q01560 CWP2YKL096W-A 279 nt8.26□□□□□ -1.09
NPL3Q01560 SRP54YPR088C 1626 nt8.25□□□□□ -1.09
NPL3Q01560 SSL2YIL143C 2532 nt8.24□□□□□ -1.09
NPL3Q01560 KRR1YCL059C 951 nt8.24□□□□□ -1.09
NPL3Q01560 SDS24YBR214W 1584 nt8.23□□□□□ -1.09
NPL3Q01560 CYC3YAL039C 810 nt8.23□□□□□ -1.09 RIP-Chip
NPL3Q01560 RPC31YNL151C 756 nt8.23□□□□□ -1.09
NPL3Q01560 ENO1YGR254W 1314 nt8.23□□□□□ -1.09 RIP-Chip
NPL3Q01560 HXT10YFL011W 1641 nt8.22□□□□□ -1.09
NPL3Q01560 YPL277CYPL277C 1464 nt8.22□□□□□ -1.09
NPL3Q01560 HMT1YBR034C 1047 nt8.22□□□□□ -1.09 RIP-Chip
NPL3Q01560 RIM2YBR192W 1134 nt8.22□□□□□ -1.09
NPL3Q01560 SWM1YDR260C 513 nt8.21□□□□□ -1.1
NPL3Q01560 BUD20YLR074C 501 nt8.21□□□□□ -1.1 RIP-Chip
NPL3Q01560 KGD2YDR148C 1392 nt8.21□□□□□ -1.1
NPL3Q01560 GAL2YLR081W 1725 nt8.2□□□□□ -1.1
NPL3Q01560 SAN1YDR143C 1833 nt8.19□□□□□ -1.1
NPL3Q01560 YPT11YNL304W 1254 nt8.19□□□□□ -1.1 RIP-Chip
NPL3Q01560 SBP1YHL034C 885 nt8.18□□□□□ -1.1
NPL3Q01560 VBA3YCL069W 1377 nt8.18□□□□□ -1.1
NPL3Q01560 SAM50YNL026W 1455 nt8.18□□□□□ -1.1
NPL3Q01560 SER2YGR208W 930 nt8.17□□□□□ -1.1
NPL3Q01560 NBA1YOL070C 1506 nt8.17□□□□□ -1.1
NPL3Q01560 LYS20YDL182W 1287 nt8.16□□□□□ -1.1
NPL3Q01560 SRP102YKL154W 735 nt8.16□□□□□ -1.1
NPL3Q01560 YLR280CYLR280C 351 nt8.15□□□□□ -1.1
NPL3Q01560 PZF1YPR186C 1290 nt8.15□□□□□ -1.1
NPL3Q01560 GAS1YMR307W 1680 nt8.14□□□□□ -1.11
NPL3Q01560 HTS1YPR033C 1641 nt8.14□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms