Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL20P78556 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL20P78556 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.52■□□□□ 0.88
CCL20P78556 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL20P78556 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL20P78556 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL20P78556 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.51■□□□□ 0.87
CCL20P78556 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL20P78556 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CCL20P78556 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCL20P78556 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCL20P78556 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.49■□□□□ 0.87
CCL20P78556 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CCL20P78556 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCL20P78556 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL20P78556 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL20P78556 BX255925.1-201ENST00000566954 1854 ntBASIC20.49■□□□□ 0.87
CCL20P78556 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCL20P78556 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL20P78556 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.48■□□□□ 0.87
CCL20P78556 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.48■□□□□ 0.87
CCL20P78556 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCL20P78556 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL20P78556 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCL20P78556 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCL20P78556 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL20P78556 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL20P78556 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.46■□□□□ 0.87
CCL20P78556 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL20P78556 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL20P78556 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL20P78556 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL20P78556 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL20P78556 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL20P78556 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.44■□□□□ 0.86
CCL20P78556 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.44■□□□□ 0.86
CCL20P78556 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL20P78556 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL20P78556 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCL20P78556 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.43■□□□□ 0.86
CCL20P78556 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCL20P78556 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCL20P78556 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
CCL20P78556 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.42■□□□□ 0.86
CCL20P78556 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCL20P78556 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCL20P78556 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCL20P78556 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL20P78556 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCL20P78556 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL20P78556 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL20P78556 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.41■□□□□ 0.86
CCL20P78556 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL20P78556 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL20P78556 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.41■□□□□ 0.86
CCL20P78556 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCL20P78556 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.39■□□□□ 0.86
CCL20P78556 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCL20P78556 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CCL20P78556 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.38■□□□□ 0.85
CCL20P78556 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCL20P78556 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL20P78556 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCL20P78556 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CCL20P78556 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL20P78556 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL20P78556 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL20P78556 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCL20P78556 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL20P78556 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCL20P78556 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL20P78556 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL20P78556 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.34■□□□□ 0.85
CCL20P78556 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCL20P78556 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCL20P78556 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCL20P78556 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.33■□□□□ 0.84
CCL20P78556 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL20P78556 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL20P78556 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL20P78556 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCL20P78556 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL20P78556 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL20P78556 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCL20P78556 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.31■□□□□ 0.84
CCL20P78556 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.31■□□□□ 0.84
CCL20P78556 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCL20P78556 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.3■□□□□ 0.84
CCL20P78556 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCL20P78556 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
CCL20P78556 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCL20P78556 AC091060.1-201ENST00000623524 1766 ntBASIC20.29■□□□□ 0.84
CCL20P78556 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCL20P78556 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCL20P78556 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.28■□□□□ 0.84
CCL20P78556 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.28■□□□□ 0.84
CCL20P78556 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCL20P78556 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.27■□□□□ 0.84
CCL20P78556 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCL20P78556 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms