Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPP38P78345 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RPP38P78345 AC142086.6-201ENST00000621154 1765 ntBASIC24.39■■□□□ 1.5
RPP38P78345 AC087741.3-201ENST00000624270 1347 ntBASIC24.39■■□□□ 1.5
RPP38P78345 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RPP38P78345 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.39■■□□□ 1.49
RPP38P78345 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RPP38P78345 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RPP38P78345 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.49
RPP38P78345 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RPP38P78345 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPP38P78345 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPP38P78345 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.37■■□□□ 1.49
RPP38P78345 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPP38P78345 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RPP38P78345 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPP38P78345 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.36■■□□□ 1.49
RPP38P78345 AL135925.1-201ENST00000605920 1701 ntBASIC24.36■■□□□ 1.49
RPP38P78345 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPP38P78345 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.36■■□□□ 1.49
RPP38P78345 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPP38P78345 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.35■■□□□ 1.49
RPP38P78345 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPP38P78345 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.35■■□□□ 1.49
RPP38P78345 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPP38P78345 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
RPP38P78345 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RPP38P78345 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RPP38P78345 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPP38P78345 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.33■■□□□ 1.49
RPP38P78345 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RPP38P78345 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RPP38P78345 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPP38P78345 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
RPP38P78345 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RPP38P78345 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RPP38P78345 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RPP38P78345 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.3■■□□□ 1.48
RPP38P78345 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPP38P78345 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPP38P78345 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.29■■□□□ 1.48
RPP38P78345 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RPP38P78345 AC108673.1-201ENST00000510422 1159 ntBASIC24.28■■□□□ 1.48
RPP38P78345 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.27■■□□□ 1.48
RPP38P78345 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RPP38P78345 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.27■■□□□ 1.48
RPP38P78345 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.26■■□□□ 1.47
RPP38P78345 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPP38P78345 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
RPP38P78345 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
RPP38P78345 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RPP38P78345 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.25■■□□□ 1.47
RPP38P78345 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RPP38P78345 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.25■■□□□ 1.47
RPP38P78345 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RPP38P78345 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RPP38P78345 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RPP38P78345 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
RPP38P78345 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RPP38P78345 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RPP38P78345 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RPP38P78345 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RPP38P78345 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RPP38P78345 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RPP38P78345 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RPP38P78345 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.2■■□□□ 1.46
RPP38P78345 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPP38P78345 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RPP38P78345 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPP38P78345 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPP38P78345 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPP38P78345 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.17■■□□□ 1.46
RPP38P78345 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPP38P78345 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.15■■□□□ 1.46
RPP38P78345 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RPP38P78345 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RPP38P78345 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
RPP38P78345 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.14■■□□□ 1.45
RPP38P78345 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
RPP38P78345 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
RPP38P78345 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RPP38P78345 AL139393.2-201ENST00000608721 2025 ntBASIC24.13■■□□□ 1.45
RPP38P78345 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RPP38P78345 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.13■■□□□ 1.45
RPP38P78345 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RPP38P78345 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.13■■□□□ 1.45
RPP38P78345 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPP38P78345 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPP38P78345 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPP38P78345 AC010864.1-201ENST00000609407 1511 ntBASIC24.12■■□□□ 1.45
RPP38P78345 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPP38P78345 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RPP38P78345 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RPP38P78345 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPP38P78345 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
RPP38P78345 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RPP38P78345 MIR6090-201ENST00000622481 60 ntBASIC24.09■■□□□ 1.45
RPP38P78345 DRD5P2-201ENST00000421395 2012 ntBASIC24.09■■□□□ 1.45
RPP38P78345 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
RPP38P78345 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms