Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CLDN15P56746 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLDN15P56746 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLDN15P56746 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLDN15P56746 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.38■■□□□ 1.33
CLDN15P56746 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.37■■□□□ 1.33
CLDN15P56746 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.37■■□□□ 1.33
CLDN15P56746 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLDN15P56746 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLDN15P56746 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLDN15P56746 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLDN15P56746 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.35■■□□□ 1.33
CLDN15P56746 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.34■■□□□ 1.33
CLDN15P56746 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLDN15P56746 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.32■■□□□ 1.32
CLDN15P56746 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CLDN15P56746 ABCB10P1-201ENST00000614297 2181 ntBASIC23.31■■□□□ 1.32
CLDN15P56746 LINC00273-201ENST00000539813 1452 ntBASIC23.3■■□□□ 1.32
CLDN15P56746 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CLDN15P56746 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLDN15P56746 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.3■■□□□ 1.32
CLDN15P56746 LINC01971-201ENST00000617888 1048 ntBASIC23.3■■□□□ 1.32
CLDN15P56746 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.3■■□□□ 1.32
CLDN15P56746 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLDN15P56746 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CLDN15P56746 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN15P56746 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN15P56746 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN15P56746 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN15P56746 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.27■■□□□ 1.32
CLDN15P56746 DUX4L11-201ENST00000611504 1267 ntBASIC23.27■■□□□ 1.32
CLDN15P56746 DUX4L12-201ENST00000614593 1267 ntBASIC23.27■■□□□ 1.32
CLDN15P56746 DUX4L14-201ENST00000621227 1267 ntBASIC23.27■■□□□ 1.32
CLDN15P56746 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.27■■□□□ 1.32
CLDN15P56746 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.27■■□□□ 1.32
CLDN15P56746 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CLDN15P56746 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CLDN15P56746 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.26■■□□□ 1.31
CLDN15P56746 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CLDN15P56746 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN15P56746 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN15P56746 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CLDN15P56746 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN15P56746 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN15P56746 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN15P56746 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CLDN15P56746 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN15P56746 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.23■■□□□ 1.31
CLDN15P56746 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN15P56746 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN15P56746 AC135983.2-203ENST00000454486 1613 ntBASIC23.22■■□□□ 1.31
CLDN15P56746 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
CLDN15P56746 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.21■■□□□ 1.31
CLDN15P56746 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.21■■□□□ 1.31
CLDN15P56746 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLDN15P56746 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN15P56746 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN15P56746 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.2■■□□□ 1.3
CLDN15P56746 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.2■■□□□ 1.3
CLDN15P56746 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.2■■□□□ 1.3
CLDN15P56746 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN15P56746 WHAMMP2-203ENST00000563942 1603 ntBASIC23.19■■□□□ 1.3
CLDN15P56746 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.19■■□□□ 1.3
CLDN15P56746 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CLDN15P56746 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.18■■□□□ 1.3
CLDN15P56746 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.18■■□□□ 1.3
CLDN15P56746 MIR3648-2-201ENST00000581792 180 ntBASIC23.18■■□□□ 1.3
CLDN15P56746 MIR3648-1-201ENST00000615959 180 ntBASIC23.18■■□□□ 1.3
CLDN15P56746 CR559946.2-201ENST00000623684 991 ntBASIC23.18■■□□□ 1.3
CLDN15P56746 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN15P56746 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLDN15P56746 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CLDN15P56746 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.17■■□□□ 1.3
CLDN15P56746 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CLDN15P56746 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN15P56746 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN15P56746 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN15P56746 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.16■■□□□ 1.3
CLDN15P56746 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L13-201ENST00000554103 1267 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L15-201ENST00000611059 1267 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L23-201ENST00000615195 1269 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L24-201ENST00000617576 1269 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L22-201ENST00000618238 1269 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L20-201ENST00000619712 1269 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L21-201ENST00000622058 1269 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L10-201ENST00000622460 1267 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 DUX4L25-201ENST00000624915 1269 ntBASIC23.16■■□□□ 1.3
CLDN15P56746 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.16■■□□□ 1.3
CLDN15P56746 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN15P56746 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN15P56746 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN15P56746 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.15■■□□□ 1.3
CLDN15P56746 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN15P56746 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN15P56746 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
CLDN15P56746 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN15P56746 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN15P56746 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms