Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PDE1AP54750 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PDE1AP54750 AC127502.1-201ENST00000399971 1502 ntBASIC31.94■■■□□ 2.7
PDE1AP54750 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.93■■■□□ 2.7
PDE1AP54750 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDE1AP54750 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.92■■■□□ 2.7
PDE1AP54750 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDE1AP54750 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PDE1AP54750 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.91■■■□□ 2.7
PDE1AP54750 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDE1AP54750 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.89■■■□□ 2.7
PDE1AP54750 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PDE1AP54750 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PDE1AP54750 AL162393.1-201ENST00000437852 946 ntBASIC31.88■■■□□ 2.69
PDE1AP54750 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
PDE1AP54750 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
PDE1AP54750 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PDE1AP54750 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
PDE1AP54750 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDE1AP54750 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDE1AP54750 MIR6090-201ENST00000622481 60 ntBASIC31.84■■■□□ 2.69
PDE1AP54750 AC087741.3-201ENST00000624270 1347 ntBASIC31.83■■■□□ 2.69
PDE1AP54750 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PDE1AP54750 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PDE1AP54750 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PDE1AP54750 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PDE1AP54750 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
PDE1AP54750 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PDE1AP54750 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PDE1AP54750 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDE1AP54750 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
PDE1AP54750 AC108673.1-201ENST00000510422 1159 ntBASIC31.8■■■□□ 2.68
PDE1AP54750 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDE1AP54750 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
PDE1AP54750 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PDE1AP54750 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PDE1AP54750 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PDE1AP54750 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
PDE1AP54750 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.78■■■□□ 2.68
PDE1AP54750 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PDE1AP54750 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.76■■■□□ 2.67
PDE1AP54750 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.75■■■□□ 2.67
PDE1AP54750 AP004833.2-201ENST00000532228 1454 ntBASIC31.74■■■□□ 2.67
PDE1AP54750 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PDE1AP54750 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
PDE1AP54750 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
PDE1AP54750 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PDE1AP54750 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
PDE1AP54750 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PDE1AP54750 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDE1AP54750 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDE1AP54750 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.68■■■□□ 2.66
PDE1AP54750 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PDE1AP54750 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PDE1AP54750 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.68■■■□□ 2.66
PDE1AP54750 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PDE1AP54750 DRD5P2-201ENST00000421395 2012 ntBASIC31.68■■■□□ 2.66
PDE1AP54750 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.67■■■□□ 2.66
PDE1AP54750 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
PDE1AP54750 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
PDE1AP54750 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.66■■■□□ 2.66
PDE1AP54750 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PDE1AP54750 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDE1AP54750 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
PDE1AP54750 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PDE1AP54750 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PDE1AP54750 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PDE1AP54750 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.62■■■□□ 2.65
PDE1AP54750 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
PDE1AP54750 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
PDE1AP54750 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.61■■■□□ 2.65
PDE1AP54750 AC044849.2-201ENST00000606596 710 ntBASIC31.61■■■□□ 2.65
PDE1AP54750 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PDE1AP54750 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDE1AP54750 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PDE1AP54750 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.6■■■□□ 2.65
PDE1AP54750 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.6■■■□□ 2.65
PDE1AP54750 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.59■■■□□ 2.65
PDE1AP54750 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDE1AP54750 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDE1AP54750 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PDE1AP54750 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PDE1AP54750 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PDE1AP54750 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDE1AP54750 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
PDE1AP54750 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDE1AP54750 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDE1AP54750 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
PDE1AP54750 RPS2P35-201ENST00000443417 897 ntBASIC31.56■■■□□ 2.64
PDE1AP54750 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
PDE1AP54750 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
PDE1AP54750 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.55■■■□□ 2.64
PDE1AP54750 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.55■■■□□ 2.64
PDE1AP54750 AC135983.2-203ENST00000454486 1613 ntBASIC31.55■■■□□ 2.64
PDE1AP54750 AC142086.6-201ENST00000621154 1765 ntBASIC31.55■■■□□ 2.64
PDE1AP54750 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
PDE1AP54750 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.54■■■□□ 2.64
PDE1AP54750 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.54■■■□□ 2.64
PDE1AP54750 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.54■■■□□ 2.64
PDE1AP54750 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms