Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
TNFRSF1AP19438 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.99■■□□□ 1.11
TNFRSF1AP19438 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF1AP19438 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF1AP19438 AC127502.1-201ENST00000399971 1502 ntBASIC21.99■■□□□ 1.11
TNFRSF1AP19438 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF1AP19438 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF1AP19438 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
TNFRSF1AP19438 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF1AP19438 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF1AP19438 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF1AP19438 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.96■■□□□ 1.11
TNFRSF1AP19438 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFRSF1AP19438 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.96■■□□□ 1.11
TNFRSF1AP19438 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFRSF1AP19438 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFRSF1AP19438 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.96■■□□□ 1.11
TNFRSF1AP19438 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFRSF1AP19438 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.95■■□□□ 1.11
TNFRSF1AP19438 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFRSF1AP19438 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFRSF1AP19438 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.95■■□□□ 1.1
TNFRSF1AP19438 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFRSF1AP19438 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.94■■□□□ 1.1
TNFRSF1AP19438 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.94■■□□□ 1.1
TNFRSF1AP19438 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.94■■□□□ 1.1
TNFRSF1AP19438 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFRSF1AP19438 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF1AP19438 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.93■■□□□ 1.1
TNFRSF1AP19438 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF1AP19438 LINC00273-201ENST00000539813 1452 ntBASIC21.93■■□□□ 1.1
TNFRSF1AP19438 MIR7108-201ENST00000614319 87 ntBASIC21.93■■□□□ 1.1
TNFRSF1AP19438 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFRSF1AP19438 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFRSF1AP19438 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.91■■□□□ 1.1
TNFRSF1AP19438 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.91■■□□□ 1.1
TNFRSF1AP19438 LINC01971-201ENST00000617888 1048 ntBASIC21.91■■□□□ 1.1
TNFRSF1AP19438 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFRSF1AP19438 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFRSF1AP19438 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.9■■□□□ 1.1
TNFRSF1AP19438 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.9■■□□□ 1.1
TNFRSF1AP19438 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TNFRSF1AP19438 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.9■■□□□ 1.1
TNFRSF1AP19438 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNFRSF1AP19438 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TNFRSF1AP19438 ABCB10P1-201ENST00000614297 2181 ntBASIC21.88■■□□□ 1.09
TNFRSF1AP19438 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNFRSF1AP19438 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNFRSF1AP19438 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.86■■□□□ 1.09
TNFRSF1AP19438 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.86■■□□□ 1.09
TNFRSF1AP19438 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFRSF1AP19438 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
TNFRSF1AP19438 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.85■■□□□ 1.09
TNFRSF1AP19438 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TNFRSF1AP19438 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFRSF1AP19438 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TNFRSF1AP19438 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.84■■□□□ 1.09
TNFRSF1AP19438 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF1AP19438 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF1AP19438 DUX4L11-201ENST00000611504 1267 ntBASIC21.82■■□□□ 1.08
TNFRSF1AP19438 DUX4L12-201ENST00000614593 1267 ntBASIC21.82■■□□□ 1.08
TNFRSF1AP19438 DUX4L14-201ENST00000621227 1267 ntBASIC21.82■■□□□ 1.08
TNFRSF1AP19438 AP004833.2-201ENST00000532228 1454 ntBASIC21.82■■□□□ 1.08
TNFRSF1AP19438 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.82■■□□□ 1.08
TNFRSF1AP19438 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF1AP19438 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF1AP19438 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.81■■□□□ 1.08
TNFRSF1AP19438 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF1AP19438 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.81■■□□□ 1.08
TNFRSF1AP19438 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TNFRSF1AP19438 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF1AP19438 AC135983.2-203ENST00000454486 1613 ntBASIC21.8■■□□□ 1.08
TNFRSF1AP19438 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF1AP19438 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TNFRSF1AP19438 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TNFRSF1AP19438 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF1AP19438 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF1AP19438 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1AP19438 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF1AP19438 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TNFRSF1AP19438 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.78■■□□□ 1.08
TNFRSF1AP19438 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.78■■□□□ 1.08
TNFRSF1AP19438 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF1AP19438 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF1AP19438 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TNFRSF1AP19438 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF1AP19438 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF1AP19438 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF1AP19438 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFRSF1AP19438 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.76■■□□□ 1.07
TNFRSF1AP19438 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms