Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LINGO3P0C6S8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
LINGO3P0C6S8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
LINGO3P0C6S8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LINGO3P0C6S8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
LINGO3P0C6S8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.83■■□□□ 1.56
LINGO3P0C6S8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LINGO3P0C6S8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.83■■□□□ 1.56
LINGO3P0C6S8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.82■■□□□ 1.56
LINGO3P0C6S8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LINGO3P0C6S8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LINGO3P0C6S8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LINGO3P0C6S8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LINGO3P0C6S8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LINGO3P0C6S8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LINGO3P0C6S8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LINGO3P0C6S8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LINGO3P0C6S8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
LINGO3P0C6S8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LINGO3P0C6S8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
LINGO3P0C6S8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LINGO3P0C6S8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LINGO3P0C6S8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LINGO3P0C6S8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LINGO3P0C6S8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LINGO3P0C6S8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
LINGO3P0C6S8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LINGO3P0C6S8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
LINGO3P0C6S8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
LINGO3P0C6S8 AC136428.2-201ENST00000563187 214 ntBASIC24.74■■□□□ 1.55
LINGO3P0C6S8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
LINGO3P0C6S8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
LINGO3P0C6S8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.73■■□□□ 1.55
LINGO3P0C6S8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
LINGO3P0C6S8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
LINGO3P0C6S8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.73■■□□□ 1.55
LINGO3P0C6S8 AC097358.2-201ENST00000607541 1159 ntBASIC24.73■■□□□ 1.55
LINGO3P0C6S8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.73■■□□□ 1.55
LINGO3P0C6S8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LINGO3P0C6S8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LINGO3P0C6S8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.72■■□□□ 1.55
LINGO3P0C6S8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
LINGO3P0C6S8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
LINGO3P0C6S8 AL449106.1-201ENST00000608517 1980 ntBASIC24.71■■□□□ 1.55
LINGO3P0C6S8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.71■■□□□ 1.55
LINGO3P0C6S8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LINGO3P0C6S8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
LINGO3P0C6S8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LINGO3P0C6S8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.7■■□□□ 1.55
LINGO3P0C6S8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LINGO3P0C6S8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
LINGO3P0C6S8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LINGO3P0C6S8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LINGO3P0C6S8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
LINGO3P0C6S8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LINGO3P0C6S8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.69■■□□□ 1.54
LINGO3P0C6S8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
LINGO3P0C6S8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
LINGO3P0C6S8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
LINGO3P0C6S8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.68■■□□□ 1.54
LINGO3P0C6S8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
LINGO3P0C6S8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LINGO3P0C6S8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.68■■□□□ 1.54
LINGO3P0C6S8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.68■■□□□ 1.54
LINGO3P0C6S8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
LINGO3P0C6S8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LINGO3P0C6S8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.67■■□□□ 1.54
LINGO3P0C6S8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LINGO3P0C6S8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LINGO3P0C6S8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LINGO3P0C6S8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
LINGO3P0C6S8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LINGO3P0C6S8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LINGO3P0C6S8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
LINGO3P0C6S8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
LINGO3P0C6S8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LINGO3P0C6S8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LINGO3P0C6S8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.65■■□□□ 1.54
LINGO3P0C6S8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LINGO3P0C6S8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.65■■□□□ 1.54
LINGO3P0C6S8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
LINGO3P0C6S8 WASH5P-204ENST00000632292 975 ntBASIC24.64■■□□□ 1.54
LINGO3P0C6S8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
LINGO3P0C6S8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.63■■□□□ 1.53
LINGO3P0C6S8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.63■■□□□ 1.53
LINGO3P0C6S8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LINGO3P0C6S8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.62■■□□□ 1.53
LINGO3P0C6S8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LINGO3P0C6S8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LINGO3P0C6S8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.61■■□□□ 1.53
LINGO3P0C6S8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LINGO3P0C6S8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LINGO3P0C6S8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LINGO3P0C6S8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LINGO3P0C6S8 CAHM-201ENST00000604200 896 ntBASIC24.6■■□□□ 1.53
LINGO3P0C6S8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
LINGO3P0C6S8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LINGO3P0C6S8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
LINGO3P0C6S8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LINGO3P0C6S8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms