Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.1■□□□□ 0.81
TRBV12-3P01733 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV12-3P01733 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRBV12-3P01733 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV12-3P01733 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV12-3P01733 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV12-3P01733 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV12-3P01733 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRBV12-3P01733 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TRBV12-3P01733 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV12-3P01733 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV12-3P01733 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRBV12-3P01733 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV12-3P01733 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV12-3P01733 AC021231.2-201ENST00000594613 730 ntBASIC20.06■□□□□ 0.8
TRBV12-3P01733 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV12-3P01733 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
TRBV12-3P01733 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.05■□□□□ 0.8
TRBV12-3P01733 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRBV12-3P01733 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.05■□□□□ 0.8
TRBV12-3P01733 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV12-3P01733 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV12-3P01733 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV12-3P01733 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV12-3P01733 DUX4L29-201ENST00000425409 679 ntBASIC20.03■□□□□ 0.8
TRBV12-3P01733 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV12-3P01733 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TRBV12-3P01733 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRBV12-3P01733 AL139393.2-201ENST00000608721 2025 ntBASIC20.03■□□□□ 0.8
TRBV12-3P01733 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV12-3P01733 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV12-3P01733 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRBV12-3P01733 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV12-3P01733 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV12-3P01733 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV12-3P01733 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TRBV12-3P01733 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBV12-3P01733 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRBV12-3P01733 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.01■□□□□ 0.79
TRBV12-3P01733 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.01■□□□□ 0.79
TRBV12-3P01733 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.01■□□□□ 0.79
TRBV12-3P01733 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV12-3P01733 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV12-3P01733 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV12-3P01733 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20■□□□□ 0.79
TRBV12-3P01733 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV12-3P01733 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV12-3P01733 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV12-3P01733 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV12-3P01733 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV12-3P01733 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV12-3P01733 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRBV12-3P01733 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV12-3P01733 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.98■□□□□ 0.79
TRBV12-3P01733 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV12-3P01733 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRBV12-3P01733 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV12-3P01733 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV12-3P01733 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV12-3P01733 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV12-3P01733 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV12-3P01733 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV12-3P01733 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV12-3P01733 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.96■□□□□ 0.79
TRBV12-3P01733 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.96■□□□□ 0.79
TRBV12-3P01733 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV12-3P01733 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV12-3P01733 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV12-3P01733 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
TRBV12-3P01733 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV12-3P01733 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV12-3P01733 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV12-3P01733 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV12-3P01733 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV12-3P01733 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV12-3P01733 LINC00273-201ENST00000539813 1452 ntBASIC19.93■□□□□ 0.78
TRBV12-3P01733 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV12-3P01733 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV12-3P01733 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.93■□□□□ 0.78
TRBV12-3P01733 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRBV12-3P01733 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV12-3P01733 ABHD17AP4-201ENST00000411545 909 ntBASIC19.92■□□□□ 0.78
TRBV12-3P01733 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRBV12-3P01733 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV12-3P01733 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV12-3P01733 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRBV12-3P01733 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV12-3P01733 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.91■□□□□ 0.78
TRBV12-3P01733 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV12-3P01733 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.91■□□□□ 0.78
TRBV12-3P01733 AC135983.2-203ENST00000454486 1613 ntBASIC19.91■□□□□ 0.78
TRBV12-3P01733 WHAMMP2-203ENST00000563942 1603 ntBASIC19.91■□□□□ 0.78
TRBV12-3P01733 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.9■□□□□ 0.78
TRBV12-3P01733 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRBV12-3P01733 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV12-3P01733 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV12-3P01733 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV12-3P01733 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV12-3P01733 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.89■□□□□ 0.77
TRBV12-3P01733 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms