Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.83■■□□□ 1.73
SOD1P00441 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.83■■□□□ 1.73
SOD1P00441 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.83■■□□□ 1.73
SOD1P00441 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SOD1P00441 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SOD1P00441 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SOD1P00441 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.81■■□□□ 1.72
SOD1P00441 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SOD1P00441 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.8■■□□□ 1.72
SOD1P00441 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.78■■□□□ 1.72
SOD1P00441 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
SOD1P00441 LINC00273-201ENST00000539813 1452 ntBASIC25.78■■□□□ 1.72
SOD1P00441 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SOD1P00441 ABCB10P1-201ENST00000614297 2181 ntBASIC25.77■■□□□ 1.72
SOD1P00441 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.76■■□□□ 1.71
SOD1P00441 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.76■■□□□ 1.71
SOD1P00441 LINC01971-201ENST00000617888 1048 ntBASIC25.76■■□□□ 1.71
SOD1P00441 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SOD1P00441 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SOD1P00441 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
SOD1P00441 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SOD1P00441 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.74■■□□□ 1.71
SOD1P00441 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
SOD1P00441 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.74■■□□□ 1.71
SOD1P00441 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.73■■□□□ 1.71
SOD1P00441 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SOD1P00441 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SOD1P00441 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SOD1P00441 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
SOD1P00441 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.7■■□□□ 1.71
SOD1P00441 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SOD1P00441 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SOD1P00441 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.7■■□□□ 1.7
SOD1P00441 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SOD1P00441 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SOD1P00441 DUX4L11-201ENST00000611504 1267 ntBASIC25.69■■□□□ 1.7
SOD1P00441 DUX4L12-201ENST00000614593 1267 ntBASIC25.69■■□□□ 1.7
SOD1P00441 DUX4L14-201ENST00000621227 1267 ntBASIC25.69■■□□□ 1.7
SOD1P00441 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SOD1P00441 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SOD1P00441 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SOD1P00441 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SOD1P00441 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SOD1P00441 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
SOD1P00441 AC135983.2-203ENST00000454486 1613 ntBASIC25.66■■□□□ 1.7
SOD1P00441 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.66■■□□□ 1.7
SOD1P00441 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SOD1P00441 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.66■■□□□ 1.7
SOD1P00441 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SOD1P00441 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SOD1P00441 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SOD1P00441 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SOD1P00441 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.64■■□□□ 1.7
SOD1P00441 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.64■■□□□ 1.7
SOD1P00441 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SOD1P00441 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SOD1P00441 WHAMMP2-203ENST00000563942 1603 ntBASIC25.63■■□□□ 1.69
SOD1P00441 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.63■■□□□ 1.69
SOD1P00441 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.63■■□□□ 1.69
SOD1P00441 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SOD1P00441 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SOD1P00441 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SOD1P00441 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SOD1P00441 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.61■■□□□ 1.69
SOD1P00441 CR559946.2-201ENST00000623684 991 ntBASIC25.61■■□□□ 1.69
SOD1P00441 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SOD1P00441 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SOD1P00441 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SOD1P00441 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.6■■□□□ 1.69
SOD1P00441 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.6■■□□□ 1.69
SOD1P00441 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.6■■□□□ 1.69
SOD1P00441 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SOD1P00441 DUX4L13-201ENST00000554103 1267 ntBASIC25.59■■□□□ 1.69
SOD1P00441 MIR3648-2-201ENST00000581792 180 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L15-201ENST00000611059 1267 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L23-201ENST00000615195 1269 ntBASIC25.59■■□□□ 1.69
SOD1P00441 MIR3648-1-201ENST00000615959 180 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L24-201ENST00000617576 1269 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L22-201ENST00000618238 1269 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L20-201ENST00000619712 1269 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L21-201ENST00000622058 1269 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L10-201ENST00000622460 1267 ntBASIC25.59■■□□□ 1.69
SOD1P00441 DUX4L25-201ENST00000624915 1269 ntBASIC25.59■■□□□ 1.69
SOD1P00441 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SOD1P00441 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SOD1P00441 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SOD1P00441 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SOD1P00441 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.58■■□□□ 1.69
SOD1P00441 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SOD1P00441 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.58■■□□□ 1.69
SOD1P00441 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
SOD1P00441 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SOD1P00441 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SOD1P00441 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SOD1P00441 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SOD1P00441 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SOD1P00441 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SOD1P00441 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.56■■□□□ 1.68
SOD1P00441 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.56■■□□□ 1.68
SOD1P00441 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms