Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX6O95475 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.69■■□□□ 1.06
SIX6O95475 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX6O95475 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.68■■□□□ 1.06
SIX6O95475 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX6O95475 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX6O95475 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX6O95475 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX6O95475 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
SIX6O95475 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SIX6O95475 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX6O95475 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX6O95475 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX6O95475 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SIX6O95475 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX6O95475 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIX6O95475 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SIX6O95475 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SIX6O95475 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX6O95475 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SIX6O95475 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SIX6O95475 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
SIX6O95475 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
SIX6O95475 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.64■■□□□ 1.05
SIX6O95475 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX6O95475 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SIX6O95475 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX6O95475 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX6O95475 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SIX6O95475 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX6O95475 BX255925.1-201ENST00000566954 1854 ntBASIC21.61■■□□□ 1.05
SIX6O95475 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX6O95475 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.61■■□□□ 1.05
SIX6O95475 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX6O95475 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX6O95475 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.59■■□□□ 1.05
SIX6O95475 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX6O95475 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIX6O95475 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIX6O95475 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.58■■□□□ 1.05
SIX6O95475 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX6O95475 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.57■■□□□ 1.04
SIX6O95475 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX6O95475 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.57■■□□□ 1.04
SIX6O95475 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SIX6O95475 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIX6O95475 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIX6O95475 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.56■■□□□ 1.04
SIX6O95475 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX6O95475 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIX6O95475 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIX6O95475 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIX6O95475 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIX6O95475 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.55■■□□□ 1.04
SIX6O95475 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIX6O95475 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIX6O95475 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX6O95475 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX6O95475 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX6O95475 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.54■■□□□ 1.04
SIX6O95475 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX6O95475 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.53■■□□□ 1.04
SIX6O95475 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SIX6O95475 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX6O95475 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
SIX6O95475 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIX6O95475 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.52■■□□□ 1.03
SIX6O95475 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.52■■□□□ 1.03
SIX6O95475 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX6O95475 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SIX6O95475 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX6O95475 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SIX6O95475 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SIX6O95475 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SIX6O95475 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.49■■□□□ 1.03
SIX6O95475 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIX6O95475 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
SIX6O95475 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.47■■□□□ 1.03
SIX6O95475 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIX6O95475 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX6O95475 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SIX6O95475 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX6O95475 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.47■■□□□ 1.03
SIX6O95475 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIX6O95475 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.46■■□□□ 1.03
SIX6O95475 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.46■■□□□ 1.03
SIX6O95475 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.46■■□□□ 1.03
SIX6O95475 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIX6O95475 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIX6O95475 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIX6O95475 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SIX6O95475 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.45■■□□□ 1.02
SIX6O95475 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms