Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNCGO76070 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNCGO76070 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNCGO76070 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNCGO76070 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNCGO76070 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.56■□□□□ 0.4
SNCGO76070 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCGO76070 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC17.56■□□□□ 0.4
SNCGO76070 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCGO76070 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCGO76070 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNCGO76070 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCGO76070 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCGO76070 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNCGO76070 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCGO76070 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCGO76070 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.55■□□□□ 0.4
SNCGO76070 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCGO76070 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCGO76070 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCGO76070 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCGO76070 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCGO76070 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SNCGO76070 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SNCGO76070 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
SNCGO76070 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SNCGO76070 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNCGO76070 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCGO76070 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCGO76070 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCGO76070 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.53■□□□□ 0.4
SNCGO76070 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCGO76070 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCGO76070 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNCGO76070 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.52■□□□□ 0.4
SNCGO76070 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNCGO76070 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNCGO76070 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNCGO76070 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.51■□□□□ 0.39
SNCGO76070 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNCGO76070 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCGO76070 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNCGO76070 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCGO76070 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNCGO76070 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCGO76070 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCGO76070 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.49■□□□□ 0.39
SNCGO76070 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCGO76070 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCGO76070 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SNCGO76070 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.49■□□□□ 0.39
SNCGO76070 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.49■□□□□ 0.39
SNCGO76070 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCGO76070 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCGO76070 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SNCGO76070 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNCGO76070 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNCGO76070 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SNCGO76070 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNCGO76070 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCGO76070 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.48■□□□□ 0.39
SNCGO76070 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCGO76070 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCGO76070 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNCGO76070 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCGO76070 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCGO76070 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCGO76070 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNCGO76070 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCGO76070 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SNCGO76070 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCGO76070 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCGO76070 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNCGO76070 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNCGO76070 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCGO76070 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCGO76070 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCGO76070 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SNCGO76070 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCGO76070 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCGO76070 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SNCGO76070 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SNCGO76070 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNCGO76070 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNCGO76070 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.44■□□□□ 0.38
SNCGO76070 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.44■□□□□ 0.38
SNCGO76070 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNCGO76070 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCGO76070 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCGO76070 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCGO76070 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCGO76070 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SNCGO76070 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNCGO76070 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCGO76070 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCGO76070 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.41■□□□□ 0.38
SNCGO76070 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCGO76070 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCGO76070 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.41■□□□□ 0.38
SNCGO76070 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms