Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H12DA2A288 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
ZC3H12DA2A288 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H12DA2A288 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H12DA2A288 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.65■■□□□ 1.38
ZC3H12DA2A288 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.65■■□□□ 1.38
ZC3H12DA2A288 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
ZC3H12DA2A288 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.64■■□□□ 1.38
ZC3H12DA2A288 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.37
ZC3H12DA2A288 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZC3H12DA2A288 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZC3H12DA2A288 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZC3H12DA2A288 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZC3H12DA2A288 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.63■■□□□ 1.37
ZC3H12DA2A288 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.63■■□□□ 1.37
ZC3H12DA2A288 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZC3H12DA2A288 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
ZC3H12DA2A288 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.62■■□□□ 1.37
ZC3H12DA2A288 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZC3H12DA2A288 AP006261.1-201ENST00000584783 668 ntBASIC23.62■■□□□ 1.37
ZC3H12DA2A288 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZC3H12DA2A288 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
ZC3H12DA2A288 MIR3665-201ENST00000578708 105 ntBASIC23.61■■□□□ 1.37
ZC3H12DA2A288 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.61■■□□□ 1.37
ZC3H12DA2A288 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZC3H12DA2A288 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZC3H12DA2A288 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.6■■□□□ 1.37
ZC3H12DA2A288 AL162393.1-201ENST00000437852 946 ntBASIC23.6■■□□□ 1.37
ZC3H12DA2A288 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZC3H12DA2A288 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ZC3H12DA2A288 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZC3H12DA2A288 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.59■■□□□ 1.37
ZC3H12DA2A288 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.59■■□□□ 1.37
ZC3H12DA2A288 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3H12DA2A288 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.58■■□□□ 1.37
ZC3H12DA2A288 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.58■■□□□ 1.37
ZC3H12DA2A288 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZC3H12DA2A288 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZC3H12DA2A288 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H12DA2A288 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
ZC3H12DA2A288 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H12DA2A288 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H12DA2A288 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H12DA2A288 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.57■■□□□ 1.36
ZC3H12DA2A288 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.57■■□□□ 1.36
ZC3H12DA2A288 AL139393.2-201ENST00000608721 2025 ntBASIC23.56■■□□□ 1.36
ZC3H12DA2A288 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H12DA2A288 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H12DA2A288 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3H12DA2A288 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3H12DA2A288 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
ZC3H12DA2A288 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H12DA2A288 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H12DA2A288 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H12DA2A288 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.53■■□□□ 1.36
ZC3H12DA2A288 AC127502.1-201ENST00000399971 1502 ntBASIC23.53■■□□□ 1.36
ZC3H12DA2A288 AC142086.6-201ENST00000621154 1765 ntBASIC23.52■■□□□ 1.36
ZC3H12DA2A288 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H12DA2A288 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.52■■□□□ 1.36
ZC3H12DA2A288 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H12DA2A288 AC087741.3-201ENST00000624270 1347 ntBASIC23.52■■□□□ 1.36
ZC3H12DA2A288 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
ZC3H12DA2A288 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H12DA2A288 MIR6090-201ENST00000622481 60 ntBASIC23.5■■□□□ 1.35
ZC3H12DA2A288 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H12DA2A288 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H12DA2A288 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H12DA2A288 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H12DA2A288 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
ZC3H12DA2A288 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H12DA2A288 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3H12DA2A288 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3H12DA2A288 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
ZC3H12DA2A288 AC108673.1-201ENST00000510422 1159 ntBASIC23.46■■□□□ 1.35
ZC3H12DA2A288 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.45■■□□□ 1.34
ZC3H12DA2A288 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3H12DA2A288 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3H12DA2A288 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
ZC3H12DA2A288 DRD5P2-201ENST00000421395 2012 ntBASIC23.43■■□□□ 1.34
ZC3H12DA2A288 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H12DA2A288 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3H12DA2A288 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3H12DA2A288 RPS2P35-201ENST00000443417 897 ntBASIC23.41■■□□□ 1.34
ZC3H12DA2A288 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.41■■□□□ 1.34
ZC3H12DA2A288 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3H12DA2A288 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.41■■□□□ 1.34
ZC3H12DA2A288 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
ZC3H12DA2A288 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
ZC3H12DA2A288 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H12DA2A288 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H12DA2A288 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
ZC3H12DA2A288 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
ZC3H12DA2A288 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
ZC3H12DA2A288 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.38■■□□□ 1.33
ZC3H12DA2A288 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H12DA2A288 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H12DA2A288 AC044849.2-201ENST00000606596 710 ntBASIC23.38■■□□□ 1.33
ZC3H12DA2A288 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H12DA2A288 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
ZC3H12DA2A288 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms