Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TMEM238LA0A1B0GVL6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM238LA0A1B0GVL6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TMEM238LA0A1B0GVL6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238LA0A1B0GVL6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238LA0A1B0GVL6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TMEM238LA0A1B0GVL6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238LA0A1B0GVL6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238LA0A1B0GVL6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238LA0A1B0GVL6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238LA0A1B0GVL6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM238LA0A1B0GVL6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM238LA0A1B0GVL6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM238LA0A1B0GVL6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM238LA0A1B0GVL6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM238LA0A1B0GVL6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM238LA0A1B0GVL6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM238LA0A1B0GVL6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM238LA0A1B0GVL6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM238LA0A1B0GVL6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM238LA0A1B0GVL6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM238LA0A1B0GVL6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM238LA0A1B0GVL6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM238LA0A1B0GVL6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TMEM238LA0A1B0GVL6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM238LA0A1B0GVL6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TMEM238LA0A1B0GVL6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM238LA0A1B0GVL6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TMEM238LA0A1B0GVL6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.1■□□□□ 0.49
TMEM238LA0A1B0GVL6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TMEM238LA0A1B0GVL6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM238LA0A1B0GVL6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM238LA0A1B0GVL6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM238LA0A1B0GVL6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM238LA0A1B0GVL6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM238LA0A1B0GVL6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM238LA0A1B0GVL6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM238LA0A1B0GVL6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TMEM238LA0A1B0GVL6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM238LA0A1B0GVL6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM238LA0A1B0GVL6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM238LA0A1B0GVL6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM238LA0A1B0GVL6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM238LA0A1B0GVL6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM238LA0A1B0GVL6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TMEM238LA0A1B0GVL6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM238LA0A1B0GVL6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM238LA0A1B0GVL6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM238LA0A1B0GVL6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM238LA0A1B0GVL6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM238LA0A1B0GVL6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM238LA0A1B0GVL6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TMEM238LA0A1B0GVL6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TMEM238LA0A1B0GVL6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM238LA0A1B0GVL6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM238LA0A1B0GVL6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM238LA0A1B0GVL6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM238LA0A1B0GVL6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM238LA0A1B0GVL6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM238LA0A1B0GVL6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM238LA0A1B0GVL6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM238LA0A1B0GVL6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM238LA0A1B0GVL6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM238LA0A1B0GVL6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM238LA0A1B0GVL6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TMEM238LA0A1B0GVL6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM238LA0A1B0GVL6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM238LA0A1B0GVL6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM238LA0A1B0GVL6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM238LA0A1B0GVL6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TMEM238LA0A1B0GVL6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TMEM238LA0A1B0GVL6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM238LA0A1B0GVL6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM238LA0A1B0GVL6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM238LA0A1B0GVL6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM238LA0A1B0GVL6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM238LA0A1B0GVL6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM238LA0A1B0GVL6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM238LA0A1B0GVL6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM238LA0A1B0GVL6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM238LA0A1B0GVL6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM238LA0A1B0GVL6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM238LA0A1B0GVL6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM238LA0A1B0GVL6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms