Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRBV5-4A0A0C4DH59 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.78■■□□□ 1.72
TRBV5-4A0A0C4DH59 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRBV5-4A0A0C4DH59 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRBV5-4A0A0C4DH59 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.77■■□□□ 1.72
TRBV5-4A0A0C4DH59 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRBV5-4A0A0C4DH59 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRBV5-4A0A0C4DH59 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
TRBV5-4A0A0C4DH59 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRBV5-4A0A0C4DH59 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRBV5-4A0A0C4DH59 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRBV5-4A0A0C4DH59 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRBV5-4A0A0C4DH59 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRBV5-4A0A0C4DH59 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.74■■□□□ 1.71
TRBV5-4A0A0C4DH59 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.74■■□□□ 1.71
TRBV5-4A0A0C4DH59 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRBV5-4A0A0C4DH59 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.74■■□□□ 1.71
TRBV5-4A0A0C4DH59 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.73■■□□□ 1.71
TRBV5-4A0A0C4DH59 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.73■■□□□ 1.71
TRBV5-4A0A0C4DH59 AC139426.1-201ENST00000568218 2529 ntBASIC25.73■■□□□ 1.71
TRBV5-4A0A0C4DH59 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRBV5-4A0A0C4DH59 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.72■■□□□ 1.71
TRBV5-4A0A0C4DH59 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
TRBV5-4A0A0C4DH59 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.71■■□□□ 1.71
TRBV5-4A0A0C4DH59 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRBV5-4A0A0C4DH59 AP004833.2-201ENST00000532228 1454 ntBASIC25.71■■□□□ 1.71
TRBV5-4A0A0C4DH59 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
TRBV5-4A0A0C4DH59 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRBV5-4A0A0C4DH59 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.7■■□□□ 1.7
TRBV5-4A0A0C4DH59 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRBV5-4A0A0C4DH59 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRBV5-4A0A0C4DH59 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRBV5-4A0A0C4DH59 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
TRBV5-4A0A0C4DH59 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRBV5-4A0A0C4DH59 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
TRBV5-4A0A0C4DH59 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRBV5-4A0A0C4DH59 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.68■■□□□ 1.7
TRBV5-4A0A0C4DH59 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRBV5-4A0A0C4DH59 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRBV5-4A0A0C4DH59 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.67■■□□□ 1.7
TRBV5-4A0A0C4DH59 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRBV5-4A0A0C4DH59 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.66■■□□□ 1.7
TRBV5-4A0A0C4DH59 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRBV5-4A0A0C4DH59 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRBV5-4A0A0C4DH59 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
TRBV5-4A0A0C4DH59 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRBV5-4A0A0C4DH59 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRBV5-4A0A0C4DH59 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRBV5-4A0A0C4DH59 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.64■■□□□ 1.7
TRBV5-4A0A0C4DH59 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.64■■□□□ 1.69
TRBV5-4A0A0C4DH59 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRBV5-4A0A0C4DH59 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRBV5-4A0A0C4DH59 LINC00273-201ENST00000539813 1452 ntBASIC25.63■■□□□ 1.69
TRBV5-4A0A0C4DH59 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.63■■□□□ 1.69
TRBV5-4A0A0C4DH59 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRBV5-4A0A0C4DH59 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRBV5-4A0A0C4DH59 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRBV5-4A0A0C4DH59 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRBV5-4A0A0C4DH59 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRBV5-4A0A0C4DH59 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TRBV5-4A0A0C4DH59 AC021231.2-201ENST00000594613 730 ntBASIC25.6■■□□□ 1.69
TRBV5-4A0A0C4DH59 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TRBV5-4A0A0C4DH59 AC135983.2-203ENST00000454486 1613 ntBASIC25.59■■□□□ 1.69
TRBV5-4A0A0C4DH59 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRBV5-4A0A0C4DH59 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
TRBV5-4A0A0C4DH59 DUX4L29-201ENST00000425409 679 ntBASIC25.58■■□□□ 1.69
TRBV5-4A0A0C4DH59 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRBV5-4A0A0C4DH59 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.58■■□□□ 1.69
TRBV5-4A0A0C4DH59 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.57■■□□□ 1.68
TRBV5-4A0A0C4DH59 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.57■■□□□ 1.68
TRBV5-4A0A0C4DH59 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRBV5-4A0A0C4DH59 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRBV5-4A0A0C4DH59 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.56■■□□□ 1.68
TRBV5-4A0A0C4DH59 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.56■■□□□ 1.68
TRBV5-4A0A0C4DH59 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.56■■□□□ 1.68
TRBV5-4A0A0C4DH59 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRBV5-4A0A0C4DH59 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRBV5-4A0A0C4DH59 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TRBV5-4A0A0C4DH59 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRBV5-4A0A0C4DH59 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.54■■□□□ 1.68
TRBV5-4A0A0C4DH59 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRBV5-4A0A0C4DH59 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TRBV5-4A0A0C4DH59 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
TRBV5-4A0A0C4DH59 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 WHAMMP2-203ENST00000563942 1603 ntBASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRBV5-4A0A0C4DH59 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
TRBV5-4A0A0C4DH59 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.52■■□□□ 1.68
TRBV5-4A0A0C4DH59 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRBV5-4A0A0C4DH59 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRBV5-4A0A0C4DH59 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRBV5-4A0A0C4DH59 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRBV5-4A0A0C4DH59 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms