Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 AC127502.1-201ENST00000399971 1502 ntBASIC21.77■■□□□ 1.08
TRAV24A0A0B4J272 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV24A0A0B4J272 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.77■■□□□ 1.08
TRAV24A0A0B4J272 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV24A0A0B4J272 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.77■■□□□ 1.08
TRAV24A0A0B4J272 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRAV24A0A0B4J272 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV24A0A0B4J272 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV24A0A0B4J272 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRAV24A0A0B4J272 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV24A0A0B4J272 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV24A0A0B4J272 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV24A0A0B4J272 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV24A0A0B4J272 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV24A0A0B4J272 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV24A0A0B4J272 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV24A0A0B4J272 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV24A0A0B4J272 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV24A0A0B4J272 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRAV24A0A0B4J272 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAV24A0A0B4J272 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV24A0A0B4J272 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAV24A0A0B4J272 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TRAV24A0A0B4J272 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV24A0A0B4J272 AP004833.2-201ENST00000532228 1454 ntBASIC21.71■■□□□ 1.07
TRAV24A0A0B4J272 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
TRAV24A0A0B4J272 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAV24A0A0B4J272 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRAV24A0A0B4J272 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
TRAV24A0A0B4J272 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV24A0A0B4J272 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV24A0A0B4J272 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV24A0A0B4J272 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV24A0A0B4J272 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV24A0A0B4J272 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAV24A0A0B4J272 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.69■■□□□ 1.06
TRAV24A0A0B4J272 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV24A0A0B4J272 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.69■■□□□ 1.06
TRAV24A0A0B4J272 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV24A0A0B4J272 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRAV24A0A0B4J272 AC005559.1-201ENST00000589661 871 ntBASIC21.68■■□□□ 1.06
TRAV24A0A0B4J272 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV24A0A0B4J272 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRAV24A0A0B4J272 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV24A0A0B4J272 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRAV24A0A0B4J272 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.67■■□□□ 1.06
TRAV24A0A0B4J272 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.67■■□□□ 1.06
TRAV24A0A0B4J272 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV24A0A0B4J272 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV24A0A0B4J272 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV24A0A0B4J272 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV24A0A0B4J272 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAV24A0A0B4J272 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV24A0A0B4J272 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRAV24A0A0B4J272 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV24A0A0B4J272 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV24A0A0B4J272 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV24A0A0B4J272 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV24A0A0B4J272 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.65■■□□□ 1.06
TRAV24A0A0B4J272 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.65■■□□□ 1.06
TRAV24A0A0B4J272 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV24A0A0B4J272 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV24A0A0B4J272 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.63■■□□□ 1.05
TRAV24A0A0B4J272 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV24A0A0B4J272 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV24A0A0B4J272 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV24A0A0B4J272 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV24A0A0B4J272 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.61■■□□□ 1.05
TRAV24A0A0B4J272 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV24A0A0B4J272 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.61■■□□□ 1.05
TRAV24A0A0B4J272 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
TRAV24A0A0B4J272 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.6■■□□□ 1.05
TRAV24A0A0B4J272 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.59■■□□□ 1.05
TRAV24A0A0B4J272 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV24A0A0B4J272 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.59■■□□□ 1.05
TRAV24A0A0B4J272 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV24A0A0B4J272 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
TRAV24A0A0B4J272 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TRAV24A0A0B4J272 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV24A0A0B4J272 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV24A0A0B4J272 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRAV24A0A0B4J272 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRAV24A0A0B4J272 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 DUX4L28-201ENST00000623687 678 ntBASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV24A0A0B4J272 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV24A0A0B4J272 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV24A0A0B4J272 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV24A0A0B4J272 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV24A0A0B4J272 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV24A0A0B4J272 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV24A0A0B4J272 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV24A0A0B4J272 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV24A0A0B4J272 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms