Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC187A0A096LP49 RARRES2P2-201ENST00000394842 485 ntBASIC24.97■■□□□ 1.59
CCDC187A0A096LP49 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC187A0A096LP49 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
CCDC187A0A096LP49 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC187A0A096LP49 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC187A0A096LP49 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.95■■□□□ 1.58
CCDC187A0A096LP49 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.95■■□□□ 1.58
CCDC187A0A096LP49 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC187A0A096LP49 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.94■■□□□ 1.58
CCDC187A0A096LP49 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.94■■□□□ 1.58
CCDC187A0A096LP49 AL161658.1-201ENST00000623641 1967 ntBASIC24.94■■□□□ 1.58
CCDC187A0A096LP49 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.93■■□□□ 1.58
CCDC187A0A096LP49 GPX1-201ENST00000419349 1106 ntBASIC24.92■■□□□ 1.58
CCDC187A0A096LP49 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC187A0A096LP49 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC187A0A096LP49 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.91■■□□□ 1.58
CCDC187A0A096LP49 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.91■■□□□ 1.58
CCDC187A0A096LP49 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC187A0A096LP49 ABHD17AP5-201ENST00000580133 923 ntBASIC24.91■■□□□ 1.58
CCDC187A0A096LP49 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CCDC187A0A096LP49 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC187A0A096LP49 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC187A0A096LP49 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC187A0A096LP49 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
CCDC187A0A096LP49 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC187A0A096LP49 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
CCDC187A0A096LP49 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC187A0A096LP49 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC187A0A096LP49 AC010864.1-201ENST00000609407 1511 ntBASIC24.87■■□□□ 1.57
CCDC187A0A096LP49 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC187A0A096LP49 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 RNF126P1-201ENST00000567452 1320 ntBASIC24.86■■□□□ 1.57
CCDC187A0A096LP49 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCDC187A0A096LP49 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC187A0A096LP49 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC187A0A096LP49 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC187A0A096LP49 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.83■■□□□ 1.57
CCDC187A0A096LP49 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CCDC187A0A096LP49 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC187A0A096LP49 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
CCDC187A0A096LP49 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.82■■□□□ 1.56
CCDC187A0A096LP49 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC187A0A096LP49 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC187A0A096LP49 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC187A0A096LP49 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC187A0A096LP49 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.81■■□□□ 1.56
CCDC187A0A096LP49 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CCDC187A0A096LP49 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CCDC187A0A096LP49 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.8■■□□□ 1.56
CCDC187A0A096LP49 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC187A0A096LP49 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CCDC187A0A096LP49 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CCDC187A0A096LP49 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC187A0A096LP49 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC187A0A096LP49 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC187A0A096LP49 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CCDC187A0A096LP49 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC187A0A096LP49 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CCDC187A0A096LP49 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC187A0A096LP49 AC008813.1-201ENST00000536597 885 ntBASIC24.76■■□□□ 1.55
CCDC187A0A096LP49 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.76■■□□□ 1.55
CCDC187A0A096LP49 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CCDC187A0A096LP49 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CCDC187A0A096LP49 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CCDC187A0A096LP49 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC187A0A096LP49 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC187A0A096LP49 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.74■■□□□ 1.55
CCDC187A0A096LP49 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CCDC187A0A096LP49 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.74■■□□□ 1.55
CCDC187A0A096LP49 AC022413.1-201ENST00000624602 984 ntBASIC24.74■■□□□ 1.55
CCDC187A0A096LP49 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC187A0A096LP49 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC187A0A096LP49 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC187A0A096LP49 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC187A0A096LP49 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.72■■□□□ 1.55
CCDC187A0A096LP49 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.72■■□□□ 1.55
CCDC187A0A096LP49 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.71■■□□□ 1.55
CCDC187A0A096LP49 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCDC187A0A096LP49 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.7■■□□□ 1.54
CCDC187A0A096LP49 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CCDC187A0A096LP49 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCDC187A0A096LP49 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC187A0A096LP49 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC187A0A096LP49 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC187A0A096LP49 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC187A0A096LP49 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC187A0A096LP49 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC187A0A096LP49 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC187A0A096LP49 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC187A0A096LP49 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC187A0A096LP49 AC127502.1-201ENST00000399971 1502 ntBASIC24.65■■□□□ 1.54
CCDC187A0A096LP49 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC187A0A096LP49 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms