Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV9-1A0A075B6T8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV9-1A0A075B6T8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV9-1A0A075B6T8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV9-1A0A075B6T8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV9-1A0A075B6T8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV9-1A0A075B6T8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV9-1A0A075B6T8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV9-1A0A075B6T8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAV9-1A0A075B6T8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV9-1A0A075B6T8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRAV9-1A0A075B6T8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAV9-1A0A075B6T8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV9-1A0A075B6T8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TRAV9-1A0A075B6T8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV9-1A0A075B6T8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV9-1A0A075B6T8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAV9-1A0A075B6T8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV9-1A0A075B6T8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRAV9-1A0A075B6T8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV9-1A0A075B6T8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV9-1A0A075B6T8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV9-1A0A075B6T8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-1A0A075B6T8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV9-1A0A075B6T8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV9-1A0A075B6T8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
TRAV9-1A0A075B6T8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV9-1A0A075B6T8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV9-1A0A075B6T8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV9-1A0A075B6T8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV9-1A0A075B6T8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV9-1A0A075B6T8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV9-1A0A075B6T8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAV9-1A0A075B6T8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV9-1A0A075B6T8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV9-1A0A075B6T8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV9-1A0A075B6T8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV9-1A0A075B6T8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV9-1A0A075B6T8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV9-1A0A075B6T8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV9-1A0A075B6T8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV9-1A0A075B6T8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV9-1A0A075B6T8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TRAV9-1A0A075B6T8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV9-1A0A075B6T8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV9-1A0A075B6T8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV9-1A0A075B6T8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV9-1A0A075B6T8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV9-1A0A075B6T8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAV9-1A0A075B6T8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV9-1A0A075B6T8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV9-1A0A075B6T8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV9-1A0A075B6T8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV9-1A0A075B6T8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV9-1A0A075B6T8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV9-1A0A075B6T8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV9-1A0A075B6T8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRAV9-1A0A075B6T8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAV9-1A0A075B6T8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV9-1A0A075B6T8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAV9-1A0A075B6T8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV9-1A0A075B6T8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV9-1A0A075B6T8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV9-1A0A075B6T8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
TRAV9-1A0A075B6T8 AC091060.1-201ENST00000623524 1766 ntBASIC19.44■□□□□ 0.7
TRAV9-1A0A075B6T8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV9-1A0A075B6T8 AC093323.1-202ENST00000635031 2045 ntBASIC19.44■□□□□ 0.7
TRAV9-1A0A075B6T8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV9-1A0A075B6T8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV9-1A0A075B6T8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV9-1A0A075B6T8 AC015813.7-201ENST00000623294 581 ntBASIC19.42■□□□□ 0.7
TRAV9-1A0A075B6T8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV9-1A0A075B6T8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV9-1A0A075B6T8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV9-1A0A075B6T8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV9-1A0A075B6T8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRAV9-1A0A075B6T8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms