Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 CREM-207ENST00000356917 1895 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 MELK-208ENST00000536987 2125 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AP000776.1-201ENST00000530032 1663 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 RNU6-876P-201ENST00000391295 104 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 MTCYBP24-201ENST00000420387 1106 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 WRBP1-201ENST00000423352 334 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 NPM1P22-201ENST00000427761 952 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC007237.1-201ENST00000442074 499 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 TRBV8-1-201ENST00000481590 279 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 RPL34P29-201ENST00000491411 325 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 MTCO3P9-201ENST00000506989 781 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC090071.1-201ENST00000507713 644 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC106774.1-201ENST00000515105 321 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AP001646.2-201ENST00000528645 1156 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 SLC25A51P2-201ENST00000535708 889 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 SYPL1P2-201ENST00000582878 727 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC026150.3-201ENST00000602595 499 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 LLPHP1-201ENST00000603571 367 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC005034.2-201ENST00000604464 414 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC131902.3-201ENST00000611767 581 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 AC026951.2-201ENST00000613847 241 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 MIR4278-201ENST00000636094 69 ntBASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC9.03□□□□□ -0.96
SCUBE3Q8IX30 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC9.02□□□□□ -0.96
SCUBE3Q8IX30 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC9.02□□□□□ -0.96
SCUBE3Q8IX30 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
SCUBE3Q8IX30 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SCUBE3Q8IX30 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
SCUBE3Q8IX30 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC9.02□□□□□ -0.96
SCUBE3Q8IX30 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 MTND5P26-201ENST00000426018 1752 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC013444.1-201ENST00000428909 1904 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 Y_RNA.38-201ENST00000362617 102 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 VTRNA1-2-201ENST00000365241 89 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 MT-TL1-201ENST00000386347 75 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC084880.1-201ENST00000392530 545 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC002524.1-201ENST00000411687 547 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 RPL21P108-201ENST00000413857 481 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC116050.1-206ENST00000423774 213 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 OR8F1P-201ENST00000425243 930 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC073614.1-201ENST00000438690 650 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms