RNA–Protein interactions for RNA: ENST00000580258.1

AP006219.1-201, humanhuman

TSL 3 BASIC

Gene AP006219.1, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006219.1-201ENST00000580258 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
AP006219.1-201ENST00000580258 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
AP006219.1-201ENST00000580258 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
AP006219.1-201ENST00000580258 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
AP006219.1-201ENST00000580258 FOXD1Q16676 465 aa19.89■□□□□ 0.77
AP006219.1-201ENST00000580258 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
AP006219.1-201ENST00000580258 MSH5O43196 834 aa18.61■□□□□ 0.57
AP006219.1-201ENST00000580258 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
AP006219.1-201ENST00000580258 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
AP006219.1-201ENST00000580258 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
AP006219.1-201ENST00000580258 ADRA2BP18089 450 aa18.35■□□□□ 0.53
AP006219.1-201ENST00000580258 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
AP006219.1-201ENST00000580258 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
AP006219.1-201ENST00000580258 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
AP006219.1-201ENST00000580258 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
AP006219.1-201ENST00000580258 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
AP006219.1-201ENST00000580258 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
AP006219.1-201ENST00000580258 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
AP006219.1-201ENST00000580258 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
AP006219.1-201ENST00000580258 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
AP006219.1-201ENST00000580258 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
AP006219.1-201ENST00000580258 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
AP006219.1-201ENST00000580258 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
AP006219.1-201ENST00000580258 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
AP006219.1-201ENST00000580258 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
AP006219.1-201ENST00000580258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
AP006219.1-201ENST00000580258 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
AP006219.1-201ENST00000580258 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
AP006219.1-201ENST00000580258 KCNA4P22459 653 aa14.87□□□□□ -0.03
AP006219.1-201ENST00000580258 DSG3P32926 999 aa14.83□□□□□ -0.04
AP006219.1-201ENST00000580258 CAPN15O75808 1086 aa14.82□□□□□ -0.04
AP006219.1-201ENST00000580258 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
AP006219.1-201ENST00000580258 POTEHQ6S545 545 aa14.54□□□□□ -0.08
AP006219.1-201ENST00000580258 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
AP006219.1-201ENST00000580258 ABCB7O75027 752 aa14.5□□□□□ -0.09
AP006219.1-201ENST00000580258 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
AP006219.1-201ENST00000580258 APLP2Q06481 763 aa14.43□□□□□ -0.1
AP006219.1-201ENST00000580258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
AP006219.1-201ENST00000580258 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
AP006219.1-201ENST00000580258 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
AP006219.1-201ENST00000580258 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
AP006219.1-201ENST00000580258 POLA2Q14181 598 aa14.09□□□□□ -0.15
AP006219.1-201ENST00000580258 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
AP006219.1-201ENST00000580258 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
AP006219.1-201ENST00000580258 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
AP006219.1-201ENST00000580258 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
AP006219.1-201ENST00000580258 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
AP006219.1-201ENST00000580258 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
AP006219.1-201ENST00000580258 ZBTB22O15209 634 aa13.72□□□□□ -0.21
AP006219.1-201ENST00000580258 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
AP006219.1-201ENST00000580258 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
AP006219.1-201ENST00000580258 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
AP006219.1-201ENST00000580258 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
AP006219.1-201ENST00000580258 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
AP006219.1-201ENST00000580258 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
AP006219.1-201ENST00000580258 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
AP006219.1-201ENST00000580258 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
AP006219.1-201ENST00000580258 HAX1O00165 279 aa13.33□□□□□ -0.28
AP006219.1-201ENST00000580258 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
AP006219.1-201ENST00000580258 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
AP006219.1-201ENST00000580258 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
AP006219.1-201ENST00000580258 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
AP006219.1-201ENST00000580258 FBLN2P98095 1184 aa13.29□□□□□ -0.28
AP006219.1-201ENST00000580258 EVX2Q03828 476 aa13.26□□□□□ -0.29
AP006219.1-201ENST00000580258 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
AP006219.1-201ENST00000580258 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
AP006219.1-201ENST00000580258 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
AP006219.1-201ENST00000580258 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
AP006219.1-201ENST00000580258 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
AP006219.1-201ENST00000580258 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
AP006219.1-201ENST00000580258 CHADLQ6NUI6 762 aa12.98□□□□□ -0.33
AP006219.1-201ENST00000580258 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
AP006219.1-201ENST00000580258 GABBR2O75899 941 aa12.88□□□□□ -0.35
AP006219.1-201ENST00000580258 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
AP006219.1-201ENST00000580258 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
AP006219.1-201ENST00000580258 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
AP006219.1-201ENST00000580258 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
AP006219.1-201ENST00000580258 POTEIP0CG38 1075 aa12.67□□□□□ -0.38
AP006219.1-201ENST00000580258 LHX8Q68G74 356 aa12.67□□□□□ -0.38
AP006219.1-201ENST00000580258 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
AP006219.1-201ENST00000580258 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
AP006219.1-201ENST00000580258 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
AP006219.1-201ENST00000580258 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
AP006219.1-201ENST00000580258 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
AP006219.1-201ENST00000580258 CLCN6P51797 869 aa12.47□□□□□ -0.41
AP006219.1-201ENST00000580258 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
AP006219.1-201ENST00000580258 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
AP006219.1-201ENST00000580258 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
AP006219.1-201ENST00000580258 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
AP006219.1-201ENST00000580258 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
AP006219.1-201ENST00000580258 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
AP006219.1-201ENST00000580258 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
AP006219.1-201ENST00000580258 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
AP006219.1-201ENST00000580258 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
AP006219.1-201ENST00000580258 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
AP006219.1-201ENST00000580258 PROM2Q8N271 834 aa12.18□□□□□ -0.46
AP006219.1-201ENST00000580258 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
AP006219.1-201ENST00000580258 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
AP006219.1-201ENST00000580258 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
AP006219.1-201ENST00000580258 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms