Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CCNA1P78396 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CCNA1P78396 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.96□□□□□ -1.14
CCNA1P78396 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.96□□□□□ -1.14
CCNA1P78396 AC090771.1-201ENST00000585803 1618 ntBASIC7.96□□□□□ -1.14
CCNA1P78396 AC018765.1-201ENST00000623357 3446 ntBASIC7.96□□□□□ -1.14
CCNA1P78396 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.95□□□□□ -1.14
CCNA1P78396 AC006511.2-201ENST00000388966 660 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.95□□□□□ -1.14
CCNA1P78396 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.95□□□□□ -1.14
CCNA1P78396 RPL5P6-201ENST00000425640 886 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 GAPDHP37-201ENST00000442317 968 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 OR51P1P-201ENST00000447547 942 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 AL583856.1-201ENST00000454078 1101 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 NMNAT1P3-201ENST00000457517 888 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 AC096922.1-201ENST00000461635 651 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 PGBD4P1-201ENST00000473644 407 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.95□□□□□ -1.14
CCNA1P78396 RN7SL379P-201ENST00000479912 293 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.95□□□□□ -1.14
CCNA1P78396 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.95□□□□□ -1.14
CCNA1P78396 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 PPIAP14-201ENST00000577627 496 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.95□□□□□ -1.14
CCNA1P78396 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CCNA1P78396 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.95□□□□□ -1.14
CCNA1P78396 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 AP002800.1-201ENST00000624982 2225 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.95□□□□□ -1.14
CCNA1P78396 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 AC129502.1-201ENST00000623261 1654 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 SALL1P1-201ENST00000438101 3837 ntBASIC7.95□□□□□ -1.14
CCNA1P78396 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CCNA1P78396 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCNA1P78396 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.94□□□□□ -1.14
CCNA1P78396 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.94□□□□□ -1.14
CCNA1P78396 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.94□□□□□ -1.14
CCNA1P78396 RNA5SP172-201ENST00000365061 118 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.94□□□□□ -1.14
CCNA1P78396 CTSLP6-201ENST00000458273 1002 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 RN7SL216P-201ENST00000471607 298 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.94□□□□□ -1.14
CCNA1P78396 AC090888.3-201ENST00000558917 509 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 RN7SL230P-201ENST00000580835 303 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.94□□□□□ -1.14
CCNA1P78396 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.94□□□□□ -1.14
CCNA1P78396 AP005329.3-201ENST00000609924 686 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 AC068726.1-201ENST00000610993 341 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.94□□□□□ -1.14
CCNA1P78396 TNFSF15-201ENST00000374044 2789 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 AC026464.2-201ENST00000567834 2421 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.94□□□□□ -1.14
CCNA1P78396 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 AC010886.1-201ENST00000437380 2869 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
CCNA1P78396 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 AC025040.2-201ENST00000558657 1852 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCNA1P78396 SAMMSON-222ENST00000641901 2727 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 TPTE2P2-201ENST00000403471 1466 ntBASIC7.94□□□□□ -1.14
CCNA1P78396 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.93□□□□□ -1.14
CCNA1P78396 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CCNA1P78396 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 RNA5SP85-201ENST00000365378 119 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.93□□□□□ -1.14
CCNA1P78396 VIM2P-201ENST00000402383 1294 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms