RNA–Protein interactions for RNA: ENST00000229554.9

RSPH4A-201, Transcript of radial spoke head component 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPH4A, Length 2,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH4A-201ENST00000229554 NISCHQ9Y2I1 1504 aa15.76■□□□□ 0.11
RSPH4A-201ENST00000229554 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
RSPH4A-201ENST00000229554 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
RSPH4A-201ENST00000229554 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
RSPH4A-201ENST00000229554 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
RSPH4A-201ENST00000229554 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
RSPH4A-201ENST00000229554 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
RSPH4A-201ENST00000229554 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
RSPH4A-201ENST00000229554 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
RSPH4A-201ENST00000229554 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
RSPH4A-201ENST00000229554 HRCP23327 699 aa13.16□□□□□ -0.3
RSPH4A-201ENST00000229554 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
RSPH4A-201ENST00000229554 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
RSPH4A-201ENST00000229554 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
RSPH4A-201ENST00000229554 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
RSPH4A-201ENST00000229554 MYT1Q01538 1121 aa12.97□□□□□ -0.33
RSPH4A-201ENST00000229554 FAM9AQ8IZU1 332 aaPredicted RBP12.85□□□□□ -0.35
RSPH4A-201ENST00000229554 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
RSPH4A-201ENST00000229554 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
RSPH4A-201ENST00000229554 ABCC9O60706 1549 aa12.62□□□□□ -0.39
RSPH4A-201ENST00000229554 TTBK1Q5TCY1 1321 aaPredicted RBP12.58□□□□□ -0.4
RSPH4A-201ENST00000229554 SLC24A1O60721 1099 aa12.52□□□□□ -0.41
RSPH4A-201ENST00000229554 NACADO15069 1562 aa12.52□□□□□ -0.41
RSPH4A-201ENST00000229554 PRKCSHP14314 528 aaPredicted RBP12.51□□□□□ -0.41
RSPH4A-201ENST00000229554 SCRIBQ14160 1630 aa12.46□□□□□ -0.42
RSPH4A-201ENST00000229554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
RSPH4A-201ENST00000229554 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
RSPH4A-201ENST00000229554 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
RSPH4A-201ENST00000229554 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
RSPH4A-201ENST00000229554 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
RSPH4A-201ENST00000229554 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
RSPH4A-201ENST00000229554 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.45
RSPH4A-201ENST00000229554 NEUROD1Q13562 356 aa12.21□□□□□ -0.46
RSPH4A-201ENST00000229554 APLP2Q06481 763 aa12.2□□□□□ -0.46
RSPH4A-201ENST00000229554 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
RSPH4A-201ENST00000229554 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
RSPH4A-201ENST00000229554 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
RSPH4A-201ENST00000229554 YTHDC1Q96MU7 727 aaKnown RBP12.15□□□□□ -0.46
RSPH4A-201ENST00000229554 RANGAP1P46060 587 aaPredicted RBP12.15□□□□□ -0.47
RSPH4A-201ENST00000229554 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
RSPH4A-201ENST00000229554 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
RSPH4A-201ENST00000229554 WIZO95785 1651 aa12.1□□□□□ -0.47
RSPH4A-201ENST00000229554 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
RSPH4A-201ENST00000229554 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
RSPH4A-201ENST00000229554 UNC13AQ9UPW8 1703 aa12.06□□□□□ -0.48
RSPH4A-201ENST00000229554 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
RSPH4A-201ENST00000229554 HNRNPUL2Q1KMD3 747 aaKnown RBP12.05□□□□□ -0.48
RSPH4A-201ENST00000229554 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
RSPH4A-201ENST00000229554 TOP2AP11388 1531 aaKnown RBP12.04□□□□□ -0.48
RSPH4A-201ENST00000229554 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
RSPH4A-201ENST00000229554 CCDC88BA6NC98 1476 aa12□□□□□ -0.49
RSPH4A-201ENST00000229554 SOGA1O94964 1423 aa11.99□□□□□ -0.49
RSPH4A-201ENST00000229554 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
RSPH4A-201ENST00000229554 RUSC2Q8N2Y8 1516 aa11.95□□□□□ -0.5
RSPH4A-201ENST00000229554 BCL11AQ9H165 835 aa11.95□□□□□ -0.5
RSPH4A-201ENST00000229554 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
RSPH4A-201ENST00000229554 CEP162Q5TB80 1403 aa11.93□□□□□ -0.5
RSPH4A-201ENST00000229554 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
RSPH4A-201ENST00000229554 PEG3Q9GZU2 1588 aa11.91□□□□□ -0.5
RSPH4A-201ENST00000229554 MIER1Q8N108 512 aa11.9□□□□□ -0.5
RSPH4A-201ENST00000229554 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
RSPH4A-201ENST00000229554 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
RSPH4A-201ENST00000229554 BICRAQ9NZM4 1560 aa11.86□□□□□ -0.51
RSPH4A-201ENST00000229554 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
RSPH4A-201ENST00000229554 EEA1Q15075 1411 aa11.84□□□□□ -0.51
RSPH4A-201ENST00000229554 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
RSPH4A-201ENST00000229554 ITGAEP38570 1179 aa11.75□□□□□ -0.53
RSPH4A-201ENST00000229554 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
RSPH4A-201ENST00000229554 ATAD2BQ9ULI0 1458 aa11.67□□□□□ -0.54
RSPH4A-201ENST00000229554 CLIP1P30622 1438 aa11.67□□□□□ -0.54
RSPH4A-201ENST00000229554 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
RSPH4A-201ENST00000229554 KIF21BO75037 1637 aa11.65□□□□□ -0.54
RSPH4A-201ENST00000229554 BAZ1BQ9UIG0 1483 aaKnown RBP11.64□□□□□ -0.55
RSPH4A-201ENST00000229554 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
RSPH4A-201ENST00000229554 RAPGEF2Q9Y4G8 1499 aa11.61□□□□□ -0.55
RSPH4A-201ENST00000229554 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
RSPH4A-201ENST00000229554 CEP164Q9UPV0 1460 aa11.6□□□□□ -0.55
RSPH4A-201ENST00000229554 BCANQ96GW7 911 aa11.59□□□□□ -0.55
RSPH4A-201ENST00000229554 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
RSPH4A-201ENST00000229554 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
RSPH4A-201ENST00000229554 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
RSPH4A-201ENST00000229554 BIVM-ERCC5R4GMW8 1640 aa11.56□□□□□ -0.56
RSPH4A-201ENST00000229554 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
RSPH4A-201ENST00000229554 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
RSPH4A-201ENST00000229554 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
RSPH4A-201ENST00000229554 EIF5BO60841 1220 aaKnown RBP11.52□□□□□ -0.56
RSPH4A-201ENST00000229554 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
RSPH4A-201ENST00000229554 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
RSPH4A-201ENST00000229554 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
RSPH4A-201ENST00000229554 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
RSPH4A-201ENST00000229554 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
RSPH4A-201ENST00000229554 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
RSPH4A-201ENST00000229554 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
RSPH4A-201ENST00000229554 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
RSPH4A-201ENST00000229554 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
RSPH4A-201ENST00000229554 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
RSPH4A-201ENST00000229554 ARAP1Q96P48 1450 aa11.39□□□□□ -0.59
RSPH4A-201ENST00000229554 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
RSPH4A-201ENST00000229554 CFTRP13569 1480 aa11.38□□□□□ -0.59
RSPH4A-201ENST00000229554 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms