Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 OR52Y1P-201ENST00000452418 828 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 NPM1P9-201ENST00000453156 844 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 AGKP1-201ENST00000455254 1263 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.25□□□□□ -1.09
CNGA1P29973 MED28P7-201ENST00000456611 530 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 RN7SL168P-201ENST00000463821 279 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.25□□□□□ -1.09
CNGA1P29973 AC093827.1-201ENST00000480094 861 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 AC009567.2-201ENST00000502989 349 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CNGA1P29973 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.25□□□□□ -1.09
CNGA1P29973 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.25□□□□□ -1.09
CNGA1P29973 RNU6-467P-201ENST00000517027 110 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 AC025423.2-201ENST00000537570 439 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 AC069240.2-201ENST00000550242 609 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.25□□□□□ -1.09
CNGA1P29973 AC036176.3-201ENST00000602456 418 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.25□□□□□ -1.09
CNGA1P29973 AC104307.1-201ENST00000616142 196 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CNGA1P29973 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CNGA1P29973 AC090132.1-201ENST00000524071 1480 ntBASIC8.25□□□□□ -1.09
CNGA1P29973 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CNGA1P29973 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CNGA1P29973 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.25□□□□□ -1.09
CNGA1P29973 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.24□□□□□ -1.09
CNGA1P29973 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.24□□□□□ -1.09
CNGA1P29973 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC245036.1-201ENST00000391727 309 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 RN7SKP205-201ENST00000410999 307 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 RAC1P4-201ENST00000419413 579 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 FTH1P10-202ENST00000430907 550 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 FTLP17-201ENST00000432567 525 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 RPL3P11-201ENST00000434028 1146 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC083855.1-201ENST00000440041 258 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC079193.1-201ENST00000460497 588 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 NFU1-207ENST00000462320 558 ntTSL 4 BASIC8.24□□□□□ -1.09
CNGA1P29973 PABPC1P10-201ENST00000464731 381 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC108120.1-201ENST00000506543 991 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 SNORA70.17-201ENST00000516449 133 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC8.24□□□□□ -1.09
CNGA1P29973 MIR4312-201ENST00000579909 76 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.24□□□□□ -1.09
CNGA1P29973 AC139795.3-201ENST00000606358 541 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AL008582.1-201ENST00000609612 442 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AC010998.3-201ENST00000613871 631 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AC016542.3-201ENST00000623520 619 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 CLUHP10-201ENST00000631979 980 ntBASIC8.24□□□□□ -1.09
CNGA1P29973 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CNGA1P29973 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CNGA1P29973 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.24□□□□□ -1.09
CNGA1P29973 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
CNGA1P29973 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.23□□□□□ -1.09
CNGA1P29973 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CNGA1P29973 THAP12P8-201ENST00000447914 2115 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms