Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC026774.2-201ENST00000513990 1098 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 MINOS1P4-201ENST00000515470 318 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AP002004.1-206ENST00000532441 876 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC089984.3-201ENST00000552838 363 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 ACTG1P15-201ENST00000570019 1063 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 RPL21P136-201ENST00000605378 396 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AL137000.1-201ENST00000610528 1244 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC016911.1-201ENST00000613297 452 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AP003072.5-201ENST00000623872 773 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC009135.2-201ENST00000624136 1768 ntBASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
SYNPO2Q9UMS6 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 CDY7P-201ENST00000429883 1604 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC091544.5-201ENST00000620192 3815 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 OR10D1P-201ENST00000355343 936 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 RNA5SP176-201ENST00000390956 110 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 LDHAP5-201ENST00000394996 622 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 GSTA6P-201ENST00000424144 582 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 RN7SL790P-201ENST00000474043 298 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 RN7SL655P-201ENST00000486087 298 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 MTND3P3-201ENST00000505004 126 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC008868.1-201ENST00000509786 737 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC131935.1-201ENST00000524621 333 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 GTF2IP6-201ENST00000583143 541 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 ATP5BP1-201ENST00000411980 1574 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 AC079178.2-201ENST00000439323 1624 ntBASIC8.18□□□□□ -1.1
SYNPO2Q9UMS6 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 AC018992.1-201ENST00000523778 2149 ntBASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 RNA5SP172-201ENST00000365061 118 ntBASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 RPL5P5-201ENST00000392009 893 ntBASIC8.17□□□□□ -1.1
SYNPO2Q9UMS6 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms