RNA–Protein interactions for RNA: ENST00000580907.5

CCL2-202, Transcript of C-C motif chemokine ligand 2, humanhuman

TSL 2 BASIC

Gene CCL2, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2-202ENST00000580907 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
CCL2-202ENST00000580907 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
CCL2-202ENST00000580907 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
CCL2-202ENST00000580907 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
CCL2-202ENST00000580907 FOXD1Q16676 465 aa19.73■□□□□ 0.75
CCL2-202ENST00000580907 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
CCL2-202ENST00000580907 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
CCL2-202ENST00000580907 ADRA2BP18089 450 aa18.8■□□□□ 0.6
CCL2-202ENST00000580907 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
CCL2-202ENST00000580907 MSH5O43196 834 aa18.31■□□□□ 0.52
CCL2-202ENST00000580907 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
CCL2-202ENST00000580907 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
CCL2-202ENST00000580907 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
CCL2-202ENST00000580907 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
CCL2-202ENST00000580907 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
CCL2-202ENST00000580907 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
CCL2-202ENST00000580907 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
CCL2-202ENST00000580907 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
CCL2-202ENST00000580907 KCNA4P22459 653 aa16.63■□□□□ 0.25
CCL2-202ENST00000580907 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
CCL2-202ENST00000580907 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.24
CCL2-202ENST00000580907 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
CCL2-202ENST00000580907 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
CCL2-202ENST00000580907 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
CCL2-202ENST00000580907 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
CCL2-202ENST00000580907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
CCL2-202ENST00000580907 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
CCL2-202ENST00000580907 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
CCL2-202ENST00000580907 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
CCL2-202ENST00000580907 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
CCL2-202ENST00000580907 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
CCL2-202ENST00000580907 CACNB1Q02641 598 aaPredicted RBP15.38■□□□□ 0.05
CCL2-202ENST00000580907 ZBTB22O15209 634 aa15.28■□□□□ 0.04
CCL2-202ENST00000580907 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
CCL2-202ENST00000580907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
CCL2-202ENST00000580907 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
CCL2-202ENST00000580907 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
CCL2-202ENST00000580907 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
CCL2-202ENST00000580907 APLP2Q06481 763 aa15.14■□□□□ 0.01
CCL2-202ENST00000580907 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
CCL2-202ENST00000580907 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
CCL2-202ENST00000580907 CAPN15O75808 1086 aa15.04■□□□□ -0
CCL2-202ENST00000580907 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
CCL2-202ENST00000580907 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
CCL2-202ENST00000580907 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
CCL2-202ENST00000580907 ATXN8OSP0DMR3 200 aa14.87□□□□□ -0.03
CCL2-202ENST00000580907 DSG3P32926 999 aa14.83□□□□□ -0.04
CCL2-202ENST00000580907 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
CCL2-202ENST00000580907 ABCB7O75027 752 aa14.72□□□□□ -0.05
CCL2-202ENST00000580907 POLA2Q14181 598 aa14.62□□□□□ -0.07
CCL2-202ENST00000580907 ABCC9O60706 1549 aa14.46□□□□□ -0.09
CCL2-202ENST00000580907 ZBTB12Q9Y330 459 aaPredicted RBP14.42□□□□□ -0.1
CCL2-202ENST00000580907 FBLN2P98095 1184 aa14.27□□□□□ -0.13
CCL2-202ENST00000580907 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
CCL2-202ENST00000580907 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
CCL2-202ENST00000580907 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
CCL2-202ENST00000580907 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
CCL2-202ENST00000580907 NACADO15069 1562 aa14.08□□□□□ -0.16
CCL2-202ENST00000580907 RB1CC1Q8TDY2 1594 aa14.07□□□□□ -0.16
CCL2-202ENST00000580907 SPDYE2BA6NHP3 402 aa14□□□□□ -0.17
CCL2-202ENST00000580907 SPDYE6P0CI01 402 aa14□□□□□ -0.17
CCL2-202ENST00000580907 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
CCL2-202ENST00000580907 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
CCL2-202ENST00000580907 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
CCL2-202ENST00000580907 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
CCL2-202ENST00000580907 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
CCL2-202ENST00000580907 SSUH2Q9Y2M2 353 aa13.86□□□□□ -0.19
CCL2-202ENST00000580907 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
CCL2-202ENST00000580907 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
CCL2-202ENST00000580907 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
CCL2-202ENST00000580907 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCL2-202ENST00000580907 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
CCL2-202ENST00000580907 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
CCL2-202ENST00000580907 PITPNM1O00562 1244 aa13.64□□□□□ -0.23
CCL2-202ENST00000580907 FKBP8Q14318 412 aa13.64□□□□□ -0.23
CCL2-202ENST00000580907 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
CCL2-202ENST00000580907 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
CCL2-202ENST00000580907 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.23
CCL2-202ENST00000580907 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
CCL2-202ENST00000580907 PROM2Q8N271 834 aa13.55□□□□□ -0.24
CCL2-202ENST00000580907 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
CCL2-202ENST00000580907 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
CCL2-202ENST00000580907 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
CCL2-202ENST00000580907 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCL2-202ENST00000580907 POTEHQ6S545 545 aa13.41□□□□□ -0.26
CCL2-202ENST00000580907 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
CCL2-202ENST00000580907 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
CCL2-202ENST00000580907 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
CCL2-202ENST00000580907 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
CCL2-202ENST00000580907 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
CCL2-202ENST00000580907 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
CCL2-202ENST00000580907 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
CCL2-202ENST00000580907 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
CCL2-202ENST00000580907 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
CCL2-202ENST00000580907 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CCL2-202ENST00000580907 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
CCL2-202ENST00000580907 CECR2Q9BXF3 1484 aa13.08□□□□□ -0.32
CCL2-202ENST00000580907 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
CCL2-202ENST00000580907 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
CCL2-202ENST00000580907 HAX1O00165 279 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms