RNA–Protein interactions for RNA: ENST00000616206.4

PDE4DIP-241, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2 BASIC

Gene PDE4DIP, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-241ENST00000616206 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
PDE4DIP-241ENST00000616206 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
PDE4DIP-241ENST00000616206 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
PDE4DIP-241ENST00000616206 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
PDE4DIP-241ENST00000616206 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
PDE4DIP-241ENST00000616206 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
PDE4DIP-241ENST00000616206 KCNA4P22459 653 aa17.22■□□□□ 0.35
PDE4DIP-241ENST00000616206 ADRA2BP18089 450 aa17.18■□□□□ 0.34
PDE4DIP-241ENST00000616206 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
PDE4DIP-241ENST00000616206 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
PDE4DIP-241ENST00000616206 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
PDE4DIP-241ENST00000616206 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
PDE4DIP-241ENST00000616206 FOXD1Q16676 465 aa16.53■□□□□ 0.24
PDE4DIP-241ENST00000616206 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
PDE4DIP-241ENST00000616206 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
PDE4DIP-241ENST00000616206 SLC24A1O60721 1099 aa15.97■□□□□ 0.15
PDE4DIP-241ENST00000616206 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
PDE4DIP-241ENST00000616206 PIAS4Q8N2W9 510 aaPredicted RBP15.89■□□□□ 0.13
PDE4DIP-241ENST00000616206 ZBTB22O15209 634 aa15.86■□□□□ 0.13
PDE4DIP-241ENST00000616206 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
PDE4DIP-241ENST00000616206 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
PDE4DIP-241ENST00000616206 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
PDE4DIP-241ENST00000616206 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
PDE4DIP-241ENST00000616206 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
PDE4DIP-241ENST00000616206 ABCC9O60706 1549 aa15.47■□□□□ 0.07
PDE4DIP-241ENST00000616206 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
PDE4DIP-241ENST00000616206 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
PDE4DIP-241ENST00000616206 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
PDE4DIP-241ENST00000616206 FKBP8Q14318 412 aa15.05■□□□□ -0
PDE4DIP-241ENST00000616206 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
PDE4DIP-241ENST00000616206 MSH5O43196 834 aa14.98□□□□□ -0.01
PDE4DIP-241ENST00000616206 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
PDE4DIP-241ENST00000616206 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
PDE4DIP-241ENST00000616206 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
PDE4DIP-241ENST00000616206 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
PDE4DIP-241ENST00000616206 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
PDE4DIP-241ENST00000616206 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
PDE4DIP-241ENST00000616206 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
PDE4DIP-241ENST00000616206 DCAF8L2P0C7V8 631 aa14.42□□□□□ -0.1
PDE4DIP-241ENST00000616206 PLCB2Q00722 1185 aa14.37□□□□□ -0.11
PDE4DIP-241ENST00000616206 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDE4DIP-241ENST00000616206 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
PDE4DIP-241ENST00000616206 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
PDE4DIP-241ENST00000616206 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
PDE4DIP-241ENST00000616206 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
PDE4DIP-241ENST00000616206 PRKCSHP14314 528 aaPredicted RBP14.2□□□□□ -0.14
PDE4DIP-241ENST00000616206 NACADO15069 1562 aa14.18□□□□□ -0.14
PDE4DIP-241ENST00000616206 BCANQ96GW7 911 aa14.17□□□□□ -0.14
PDE4DIP-241ENST00000616206 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
PDE4DIP-241ENST00000616206 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
PDE4DIP-241ENST00000616206 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
PDE4DIP-241ENST00000616206 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
PDE4DIP-241ENST00000616206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
PDE4DIP-241ENST00000616206 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
PDE4DIP-241ENST00000616206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDE4DIP-241ENST00000616206 MYO15BQ96JP2 1530 aa13.99□□□□□ -0.17
PDE4DIP-241ENST00000616206 ZCCHC6Q5VYS8 1495 aaKnown RBP13.99□□□□□ -0.17
PDE4DIP-241ENST00000616206 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
PDE4DIP-241ENST00000616206 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
PDE4DIP-241ENST00000616206 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
PDE4DIP-241ENST00000616206 VASPP50552 380 aaPredicted RBP13.93□□□□□ -0.18
PDE4DIP-241ENST00000616206 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
PDE4DIP-241ENST00000616206 DCAF1Q9Y4B6 1507 aa13.87□□□□□ -0.19
PDE4DIP-241ENST00000616206 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
PDE4DIP-241ENST00000616206 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
PDE4DIP-241ENST00000616206 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
PDE4DIP-241ENST00000616206 UNC13AQ9UPW8 1703 aa13.83□□□□□ -0.2
PDE4DIP-241ENST00000616206 PKD2Q13563 968 aa13.81□□□□□ -0.2
PDE4DIP-241ENST00000616206 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
PDE4DIP-241ENST00000616206 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
PDE4DIP-241ENST00000616206 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
PDE4DIP-241ENST00000616206 PROM2Q8N271 834 aa13.76□□□□□ -0.21
PDE4DIP-241ENST00000616206 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
PDE4DIP-241ENST00000616206 CUX2O14529 1486 aa13.74□□□□□ -0.21
PDE4DIP-241ENST00000616206 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
PDE4DIP-241ENST00000616206 FBLN2P98095 1184 aa13.71□□□□□ -0.21
PDE4DIP-241ENST00000616206 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
PDE4DIP-241ENST00000616206 PAXIP1Q6ZW49 1069 aaPredicted RBP13.68□□□□□ -0.22
PDE4DIP-241ENST00000616206 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
PDE4DIP-241ENST00000616206 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
PDE4DIP-241ENST00000616206 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
PDE4DIP-241ENST00000616206 APLP2Q06481 763 aa13.6□□□□□ -0.23
PDE4DIP-241ENST00000616206 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDE4DIP-241ENST00000616206 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
PDE4DIP-241ENST00000616206 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
PDE4DIP-241ENST00000616206 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
PDE4DIP-241ENST00000616206 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
PDE4DIP-241ENST00000616206 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
PDE4DIP-241ENST00000616206 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
PDE4DIP-241ENST00000616206 TSHZ2Q9NRE2 1034 aa13.47□□□□□ -0.25
PDE4DIP-241ENST00000616206 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
PDE4DIP-241ENST00000616206 RGL2O15211 777 aa13.38□□□□□ -0.27
PDE4DIP-241ENST00000616206 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
PDE4DIP-241ENST00000616206 NBR1Q14596 966 aa13.35□□□□□ -0.27
PDE4DIP-241ENST00000616206 TULP1O00294 542 aaPredicted RBP13.34□□□□□ -0.27
PDE4DIP-241ENST00000616206 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
PDE4DIP-241ENST00000616206 POLA2Q14181 598 aa13.33□□□□□ -0.28
PDE4DIP-241ENST00000616206 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
PDE4DIP-241ENST00000616206 GTF3C3Q9Y5Q9 886 aa13.25□□□□□ -0.29
PDE4DIP-241ENST00000616206 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms