Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
COL4A5P29400 RN7SL475P-201ENST00000583379 298 ntBASIC8.07□□□□□ -1.12
COL4A5P29400 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC8.07□□□□□ -1.12
COL4A5P29400 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 AL390882.1-201ENST00000618821 594 ntBASIC8.07□□□□□ -1.12
COL4A5P29400 AC103703.1-201ENST00000634783 663 ntBASIC8.07□□□□□ -1.12
COL4A5P29400 AL596275.2-203ENST00000641951 371 ntBASIC8.07□□□□□ -1.12
COL4A5P29400 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.07□□□□□ -1.12
COL4A5P29400 VN2R1P-201ENST00000449668 1743 ntBASIC8.07□□□□□ -1.12
COL4A5P29400 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 AL354854.1-201ENST00000455940 1363 ntBASIC8.07□□□□□ -1.12
COL4A5P29400 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
COL4A5P29400 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 ERG-204ENST00000398907 4809 ntTSL 5 BASIC8.07□□□□□ -1.12
COL4A5P29400 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL4A5P29400 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.07□□□□□ -1.12
COL4A5P29400 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.06□□□□□ -1.12
COL4A5P29400 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
COL4A5P29400 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC8.06□□□□□ -1.12
COL4A5P29400 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.06□□□□□ -1.12
COL4A5P29400 HMGB1P7-201ENST00000450921 612 ntBASIC8.06□□□□□ -1.12
COL4A5P29400 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC8.06□□□□□ -1.12
COL4A5P29400 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.06□□□□□ -1.12
COL4A5P29400 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.06□□□□□ -1.12
COL4A5P29400 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.06□□□□□ -1.12
COL4A5P29400 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 Z97989.1-201ENST00000531702 2421 ntBASIC8.06□□□□□ -1.12
COL4A5P29400 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.06□□□□□ -1.12
COL4A5P29400 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.06□□□□□ -1.12
COL4A5P29400 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
COL4A5P29400 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.06□□□□□ -1.12
COL4A5P29400 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
COL4A5P29400 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.06□□□□□ -1.12
COL4A5P29400 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL4A5P29400 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
COL4A5P29400 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
COL4A5P29400 RNA5SP110-201ENST00000362638 115 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
COL4A5P29400 CYCSP17-201ENST00000407870 315 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 RPS7P12-201ENST00000422385 582 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 LYPLA1P1-201ENST00000434514 622 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 VPS25P1-201ENST00000455691 508 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 RN7SL174P-201ENST00000475578 289 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 RNA5SP418-201ENST00000515951 117 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 AL162632.2-201ENST00000553933 399 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 AL512624.1-201ENST00000613638 469 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 FO681491.1-202ENST00000623392 737 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.05□□□□□ -1.12
COL4A5P29400 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.05□□□□□ -1.12
COL4A5P29400 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.05□□□□□ -1.12
COL4A5P29400 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC8.05□□□□□ -1.12
COL4A5P29400 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.05□□□□□ -1.12
COL4A5P29400 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
COL4A5P29400 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 AL157702.1-201ENST00000398764 426 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms