Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AP000550.3-201ENST00000637734 379 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC016930.1-201ENST00000468766 2205 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC074141.1-201ENST00000588129 2995 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC117409.1-201ENST00000470499 1310 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 SULT1D1P-201ENST00000458020 882 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 RN7SL104P-201ENST00000498686 293 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AC073488.9-201ENST00000631601 754 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 CASC19-208ENST00000641056 1292 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 CASC19-227ENST00000641411 1285 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 MAPK10-287ENST00000641217 3037 ntBASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RIMBP3Q9UFD9 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AL354794.2-201ENST00000424795 1248 ntBASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AC011225.1-201ENST00000457751 369 ntBASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AP003396.4-201ENST00000527574 265 ntBASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AC079395.2-201ENST00000610982 737 ntBASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 AC018692.2-201ENST00000624130 348 ntBASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
RIMBP3Q9UFD9 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 GGA2-201ENST00000309859 5973 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 RN7SKP47-201ENST00000365347 328 ntBASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AL133270.1-201ENST00000402635 279 ntBASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 YWHAEP1-201ENST00000453697 763 ntBASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 SCARNA18.1-201ENST00000516330 83 ntBASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AC010323.2-201ENST00000596405 594 ntBASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AC108673.3-201ENST00000609183 335 ntBASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RIMBP3Q9UFD9 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 MAPK10-285ENST00000641207 2746 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 418 ms