Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 RNF19BPY-201ENST00000458209 1550 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 RPA2P2-201ENST00000419698 796 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AL356981.1-201ENST00000454879 684 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AL390026.1-201ENST00000456647 457 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AF186996.1-201ENST00000466578 1015 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 IGKV1D-22-201ENST00000518953 324 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC027369.2-201ENST00000528030 440 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC079866.1-201ENST00000534985 1220 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC004805.3-201ENST00000603178 310 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC051619.3-201ENST00000560646 2426 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC090680.1-201ENST00000464696 860 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC018645.1-201ENST00000505003 109 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 PABPC1P1-201ENST00000506347 591 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 GCSHP1-201ENST00000512554 484 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC245052.7-201ENST00000601161 359 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC091133.5-201ENST00000603088 301 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 SNORD96A-201ENST00000606577 79 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC004477.3-201ENST00000614061 590 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 MBP-206ENST00000397863 4800 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC018688.1-201ENST00000636528 1754 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 PPIAP26-201ENST00000377951 522 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 U3.52-201ENST00000384034 216 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 BX119917.1-201ENST00000432517 502 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC112492.2-201ENST00000432774 1030 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 Z83313.1-201ENST00000433780 718 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC091390.1-201ENST00000433904 331 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 OR7E99P-201ENST00000505750 922 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AL110118.1-201ENST00000553543 400 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC006924.1-201ENST00000610750 559 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC006328.2-201ENST00000623198 397 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 AC012005.2-201ENST00000624333 397 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 CASC19-222ENST00000641321 1173 ntBASIC6.45□□□□□ -1.38
CHD8Q9HCK8 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD8Q9HCK8 HSPD1P4-201ENST00000547203 1702 ntBASIC6.44□□□□□ -1.38
CHD8Q9HCK8 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms