RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
TRERF1-204ENST00000372922 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
TRERF1-204ENST00000372922 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
TRERF1-204ENST00000372922 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
TRERF1-204ENST00000372922 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
TRERF1-204ENST00000372922 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
TRERF1-204ENST00000372922 APLP2Q06481 763 aa15.61■□□□□ 0.09
TRERF1-204ENST00000372922 FAM9AQ8IZU1 332 aaPredicted RBP15.6■□□□□ 0.09
TRERF1-204ENST00000372922 MYT1Q01538 1121 aa15.51■□□□□ 0.07
TRERF1-204ENST00000372922 ERICH6Q7L0X2 663 aa15.43■□□□□ 0.06
TRERF1-204ENST00000372922 TTBK1Q5TCY1 1321 aaPredicted RBP15.1■□□□□ 0.01
TRERF1-204ENST00000372922 ATP1B4Q9UN42 357 aaPredicted RBP15.04■□□□□ -0
TRERF1-204ENST00000372922 RANGAP1P46060 587 aaPredicted RBP15.03■□□□□ -0
TRERF1-204ENST00000372922 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
TRERF1-204ENST00000372922 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
TRERF1-204ENST00000372922 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
TRERF1-204ENST00000372922 CENPBP07199 599 aaPredicted RBP14.86□□□□□ -0.03
TRERF1-204ENST00000372922 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
TRERF1-204ENST00000372922 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
TRERF1-204ENST00000372922 NEFLP07196 543 aa14.69□□□□□ -0.06
TRERF1-204ENST00000372922 MYT1LQ9UL68 1186 aa14.63□□□□□ -0.07
TRERF1-204ENST00000372922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
TRERF1-204ENST00000372922 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
TRERF1-204ENST00000372922 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
TRERF1-204ENST00000372922 POLR3GLQ9BT43 218 aa14.39□□□□□ -0.11
TRERF1-204ENST00000372922 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
TRERF1-204ENST00000372922 DAXXQ9UER7 740 aaPredicted RBP14.38□□□□□ -0.11
TRERF1-204ENST00000372922 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
TRERF1-204ENST00000372922 ITGAEP38570 1179 aa14.37□□□□□ -0.11
TRERF1-204ENST00000372922 TRIM26Q12899 539 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-204ENST00000372922 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
TRERF1-204ENST00000372922 CNGB1Q14028 1251 aaPredicted RBP14.16□□□□□ -0.14
TRERF1-204ENST00000372922 RTL5Q5HYW3 569 aaPredicted RBP14.14□□□□□ -0.15
TRERF1-204ENST00000372922 EIF5BO60841 1220 aaKnown RBP14.12□□□□□ -0.15
TRERF1-204ENST00000372922 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
TRERF1-204ENST00000372922 HRCP23327 699 aa14.04□□□□□ -0.16
TRERF1-204ENST00000372922 FAM50AQ14320 339 aaKnown RBP14.04□□□□□ -0.16
TRERF1-204ENST00000372922 TRIM52Q96A61 297 aa14.02□□□□□ -0.17
TRERF1-204ENST00000372922 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
TRERF1-204ENST00000372922 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
TRERF1-204ENST00000372922 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRERF1-204ENST00000372922 ABCC9O60706 1549 aa13.91□□□□□ -0.18
TRERF1-204ENST00000372922 FBLN2P98095 1184 aa13.9□□□□□ -0.18
TRERF1-204ENST00000372922 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
TRERF1-204ENST00000372922 GLIPR1L2Q4G1C9 344 aa13.88□□□□□ -0.19
TRERF1-204ENST00000372922 NEUROD1Q13562 356 aa13.86□□□□□ -0.19
TRERF1-204ENST00000372922 BCANQ96GW7 911 aa13.83□□□□□ -0.2
TRERF1-204ENST00000372922 ZNF326Q5BKZ1 582 aaKnown RBP13.82□□□□□ -0.2
TRERF1-204ENST00000372922 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
TRERF1-204ENST00000372922 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
TRERF1-204ENST00000372922 NEFMP07197 916 aa13.79□□□□□ -0.2
TRERF1-204ENST00000372922 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
TRERF1-204ENST00000372922 ANP32CO43423 234 aa13.77□□□□□ -0.21
TRERF1-204ENST00000372922 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
TRERF1-204ENST00000372922 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
TRERF1-204ENST00000372922 CDK11AQ9UQ88 783 aaPredicted RBP13.65□□□□□ -0.22
TRERF1-204ENST00000372922 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
TRERF1-204ENST00000372922 BCL11AQ9H165 835 aa13.62□□□□□ -0.23
TRERF1-204ENST00000372922 ZNF777Q9ULD5 760 aaPredicted RBP13.62□□□□□ -0.23
TRERF1-204ENST00000372922 ARID3CA6NKF2 412 aa13.61□□□□□ -0.23
TRERF1-204ENST00000372922 P3H3Q8IVL6 736 aa13.61□□□□□ -0.23
TRERF1-204ENST00000372922 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
TRERF1-204ENST00000372922 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRERF1-204ENST00000372922 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
TRERF1-204ENST00000372922 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
TRERF1-204ENST00000372922 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
TRERF1-204ENST00000372922 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
TRERF1-204ENST00000372922 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
TRERF1-204ENST00000372922 NBR1Q14596 966 aa13.39□□□□□ -0.27
TRERF1-204ENST00000372922 HSP90AA1P07900 732 aaKnown RBP13.37□□□□□ -0.27
TRERF1-204ENST00000372922 ANP32BQ92688 251 aaKnown RBP13.36□□□□□ -0.27
TRERF1-204ENST00000372922 A0A0G2JS52 829 aa13.35□□□□□ -0.27
TRERF1-204ENST00000372922 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
TRERF1-204ENST00000372922 SCRIBQ14160 1630 aa13.35□□□□□ -0.27
TRERF1-204ENST00000372922 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
TRERF1-204ENST00000372922 ARXQ96QS3 562 aa13.34□□□□□ -0.27
TRERF1-204ENST00000372922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRERF1-204ENST00000372922 TSPY4P0CV99 314 aa13.29□□□□□ -0.28
TRERF1-204ENST00000372922 TSPY10P0CW01 314 aa13.29□□□□□ -0.28
TRERF1-204ENST00000372922 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
TRERF1-204ENST00000372922 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.27□□□□□ -0.28
TRERF1-204ENST00000372922 WDR43Q15061 677 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRERF1-204ENST00000372922 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
TRERF1-204ENST00000372922 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
TRERF1-204ENST00000372922 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
TRERF1-204ENST00000372922 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
TRERF1-204ENST00000372922 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
TRERF1-204ENST00000372922 HNRNPUQ00839 825 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRERF1-204ENST00000372922 CDK11BP21127 795 aaKnown RBP13.23□□□□□ -0.29
TRERF1-204ENST00000372922 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
TRERF1-204ENST00000372922 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
TRERF1-204ENST00000372922 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
TRERF1-204ENST00000372922 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
TRERF1-204ENST00000372922 KDM2AQ9Y2K7 1162 aa13.19□□□□□ -0.3
TRERF1-204ENST00000372922 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
TRERF1-204ENST00000372922 FKBP8Q14318 412 aa13.18□□□□□ -0.3
TRERF1-204ENST00000372922 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
TRERF1-204ENST00000372922 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
TRERF1-204ENST00000372922 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
TRERF1-204ENST00000372922 ACIN1Q9UKV3 1341 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms