RNA–Protein interactions for RNA: ENST00000512554.1

GCSHP1-201, Transcript of glycine cleavage system protein H pseudogene 1, humanhuman

BASIC

Gene GCSHP1, Length 484 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP1-201ENST00000512554 AEBP2Q6ZN18 517 aaPredicted RBP26.07■■□□□ 1.76
GCSHP1-201ENST00000512554 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
GCSHP1-201ENST00000512554 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
GCSHP1-201ENST00000512554 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
GCSHP1-201ENST00000512554 FOXD1Q16676 465 aa20.65■□□□□ 0.9
GCSHP1-201ENST00000512554 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
GCSHP1-201ENST00000512554 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
GCSHP1-201ENST00000512554 ADRA2BP18089 450 aa19.41■□□□□ 0.7
GCSHP1-201ENST00000512554 PIAS4Q8N2W9 510 aaPredicted RBP19.3■□□□□ 0.68
GCSHP1-201ENST00000512554 MSH5O43196 834 aa19.13■□□□□ 0.65
GCSHP1-201ENST00000512554 POTEDQ86YR6 584 aa18.58■□□□□ 0.56
GCSHP1-201ENST00000512554 MAPK8IP2Q13387 824 aaPredicted RBP17.82■□□□□ 0.44
GCSHP1-201ENST00000512554 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
GCSHP1-201ENST00000512554 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
GCSHP1-201ENST00000512554 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
GCSHP1-201ENST00000512554 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.37
GCSHP1-201ENST00000512554 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
GCSHP1-201ENST00000512554 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
GCSHP1-201ENST00000512554 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
GCSHP1-201ENST00000512554 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
GCSHP1-201ENST00000512554 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
GCSHP1-201ENST00000512554 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
GCSHP1-201ENST00000512554 KCNA4P22459 653 aa16.44■□□□□ 0.22
GCSHP1-201ENST00000512554 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
GCSHP1-201ENST00000512554 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
GCSHP1-201ENST00000512554 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
GCSHP1-201ENST00000512554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
GCSHP1-201ENST00000512554 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
GCSHP1-201ENST00000512554 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
GCSHP1-201ENST00000512554 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
GCSHP1-201ENST00000512554 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
GCSHP1-201ENST00000512554 CAPN15O75808 1086 aa15.56■□□□□ 0.08
GCSHP1-201ENST00000512554 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
GCSHP1-201ENST00000512554 DSG3P32926 999 aa15.44■□□□□ 0.06
GCSHP1-201ENST00000512554 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
GCSHP1-201ENST00000512554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
GCSHP1-201ENST00000512554 ABCB7O75027 752 aa15.29■□□□□ 0.04
GCSHP1-201ENST00000512554 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
GCSHP1-201ENST00000512554 MYCNP04198 464 aaPredicted RBP15.26■□□□□ 0.03
GCSHP1-201ENST00000512554 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
GCSHP1-201ENST00000512554 APLP2Q06481 763 aa15.23■□□□□ 0.03
GCSHP1-201ENST00000512554 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
GCSHP1-201ENST00000512554 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
GCSHP1-201ENST00000512554 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
GCSHP1-201ENST00000512554 ZBTB22O15209 634 aa15.17■□□□□ 0.02
GCSHP1-201ENST00000512554 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
GCSHP1-201ENST00000512554 POLA2Q14181 598 aa14.96□□□□□ -0.01
GCSHP1-201ENST00000512554 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
GCSHP1-201ENST00000512554 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
GCSHP1-201ENST00000512554 POTEHQ6S545 545 aa14.56□□□□□ -0.08
GCSHP1-201ENST00000512554 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
GCSHP1-201ENST00000512554 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
GCSHP1-201ENST00000512554 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
GCSHP1-201ENST00000512554 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
GCSHP1-201ENST00000512554 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
GCSHP1-201ENST00000512554 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
GCSHP1-201ENST00000512554 MYO15BQ96JP2 1530 aa14.37□□□□□ -0.11
GCSHP1-201ENST00000512554 MKRN4PQ13434 485 aaPredicted RBP14.34□□□□□ -0.11
GCSHP1-201ENST00000512554 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
GCSHP1-201ENST00000512554 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
GCSHP1-201ENST00000512554 FBLN2P98095 1184 aa14.28□□□□□ -0.12
GCSHP1-201ENST00000512554 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
GCSHP1-201ENST00000512554 ABCC9O60706 1549 aa14.2□□□□□ -0.14
GCSHP1-201ENST00000512554 NACADO15069 1562 aa14.17□□□□□ -0.14
GCSHP1-201ENST00000512554 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
GCSHP1-201ENST00000512554 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
GCSHP1-201ENST00000512554 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
GCSHP1-201ENST00000512554 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
GCSHP1-201ENST00000512554 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
GCSHP1-201ENST00000512554 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
GCSHP1-201ENST00000512554 SSUH2Q9Y2M2 353 aa14.01□□□□□ -0.17
GCSHP1-201ENST00000512554 RB1CC1Q8TDY2 1594 aa14□□□□□ -0.17
GCSHP1-201ENST00000512554 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
GCSHP1-201ENST00000512554 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
GCSHP1-201ENST00000512554 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
GCSHP1-201ENST00000512554 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
GCSHP1-201ENST00000512554 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
GCSHP1-201ENST00000512554 SHROOM4Q9ULL8 1493 aa13.77□□□□□ -0.21
GCSHP1-201ENST00000512554 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
GCSHP1-201ENST00000512554 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
GCSHP1-201ENST00000512554 HAX1O00165 279 aa13.74□□□□□ -0.21
GCSHP1-201ENST00000512554 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
GCSHP1-201ENST00000512554 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
GCSHP1-201ENST00000512554 EVX2Q03828 476 aa13.7□□□□□ -0.22
GCSHP1-201ENST00000512554 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
GCSHP1-201ENST00000512554 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
GCSHP1-201ENST00000512554 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
GCSHP1-201ENST00000512554 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
GCSHP1-201ENST00000512554 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
GCSHP1-201ENST00000512554 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
GCSHP1-201ENST00000512554 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
GCSHP1-201ENST00000512554 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
GCSHP1-201ENST00000512554 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
GCSHP1-201ENST00000512554 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
GCSHP1-201ENST00000512554 RSF1Q96T23 1441 aaPredicted RBP13.38□□□□□ -0.27
GCSHP1-201ENST00000512554 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
GCSHP1-201ENST00000512554 PROM2Q8N271 834 aa13.33□□□□□ -0.28
GCSHP1-201ENST00000512554 MROH2BQ7Z745 1585 aa13.32□□□□□ -0.28
GCSHP1-201ENST00000512554 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
GCSHP1-201ENST00000512554 GABBR2O75899 941 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms