Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.66□□□□□ -1.18
UBE4BO95155 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
UBE4BO95155 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.66□□□□□ -1.18
UBE4BO95155 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
UBE4BO95155 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.66□□□□□ -1.18
UBE4BO95155 CDY19P-201ENST00000411668 1613 ntBASIC7.66□□□□□ -1.18
UBE4BO95155 CDY18P-201ENST00000438294 1609 ntBASIC7.66□□□□□ -1.18
UBE4BO95155 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
UBE4BO95155 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.66□□□□□ -1.18
UBE4BO95155 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.65□□□□□ -1.18
UBE4BO95155 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 RN7SKP148-201ENST00000410179 275 ntBASIC7.65□□□□□ -1.18
UBE4BO95155 RNA5SP280-201ENST00000411230 115 ntBASIC7.65□□□□□ -1.18
UBE4BO95155 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.65□□□□□ -1.18
UBE4BO95155 CDK7P1-201ENST00000434574 693 ntBASIC7.65□□□□□ -1.18
UBE4BO95155 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.65□□□□□ -1.18
UBE4BO95155 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.65□□□□□ -1.18
UBE4BO95155 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.65□□□□□ -1.18
UBE4BO95155 AL591767.3-201ENST00000554632 525 ntBASIC7.65□□□□□ -1.18
UBE4BO95155 FAM30C-201ENST00000561158 410 ntBASIC7.65□□□□□ -1.18
UBE4BO95155 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.65□□□□□ -1.18
UBE4BO95155 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.65□□□□□ -1.18
UBE4BO95155 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.65□□□□□ -1.18
UBE4BO95155 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
UBE4BO95155 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
UBE4BO95155 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.65□□□□□ -1.19
UBE4BO95155 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.65□□□□□ -1.19
UBE4BO95155 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
UBE4BO95155 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
UBE4BO95155 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.65□□□□□ -1.19
UBE4BO95155 MAPK10-379ENST00000642013 1385 ntBASIC7.65□□□□□ -1.19
UBE4BO95155 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
UBE4BO95155 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.65□□□□□ -1.19
UBE4BO95155 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.65□□□□□ -1.19
UBE4BO95155 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 AC020658.2-201ENST00000559030 4020 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 AC009237.3-203ENST00000442128 3551 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 AC007938.1-201ENST00000562524 2902 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 ATP5BP1-201ENST00000411980 1574 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 RN7SKP47-201ENST00000365347 328 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE4BO95155 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE4BO95155 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE4BO95155 TUBBP11-201ENST00000472255 252 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 AC025271.1-201ENST00000485045 429 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE4BO95155 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE4BO95155 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 NXPE2P1-201ENST00000543705 726 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.64□□□□□ -1.19
UBE4BO95155 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 AC024085.1-201ENST00000604299 432 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 AC131009.3-201ENST00000621809 287 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 TMEM14EP-202ENST00000639378 1296 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 AC099654.15-201ENST00000639802 509 ntBASIC7.64□□□□□ -1.19
UBE4BO95155 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
UBE4BO95155 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE4BO95155 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
UBE4BO95155 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.63□□□□□ -1.19
UBE4BO95155 AC004014.2-201ENST00000623718 5122 ntBASIC7.63□□□□□ -1.19
UBE4BO95155 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
UBE4BO95155 AL136981.1-203ENST00000451452 3844 ntBASIC7.63□□□□□ -1.19
UBE4BO95155 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
UBE4BO95155 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.63□□□□□ -1.19
UBE4BO95155 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms