RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
RAG1-201ENST00000299440 SUPT5HO00267 1087 aaKnown RBP11.93□□□□□ -0.5
RAG1-201ENST00000299440 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
RAG1-201ENST00000299440 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
RAG1-201ENST00000299440 NISCHQ9Y2I1 1504 aa11.76□□□□□ -0.53
RAG1-201ENST00000299440 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
RAG1-201ENST00000299440 APLP2Q06481 763 aa11.44□□□□□ -0.58
RAG1-201ENST00000299440 RANGAP1P46060 587 aaPredicted RBP11.44□□□□□ -0.58
RAG1-201ENST00000299440 ATP1B4Q9UN42 357 aaPredicted RBP11.37□□□□□ -0.59
RAG1-201ENST00000299440 TTBK1Q5TCY1 1321 aaPredicted RBP11.34□□□□□ -0.59
RAG1-201ENST00000299440 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
RAG1-201ENST00000299440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.06□□□□□ -0.64
RAG1-201ENST00000299440 HNRNPUL2Q1KMD3 747 aaKnown RBP11.06□□□□□ -0.64
RAG1-201ENST00000299440 CHIC1Q5VXU3 224 aa11.02□□□□□ -0.64
RAG1-201ENST00000299440 UBTFP17480 764 aaKnown RBP11.02□□□□□ -0.65
RAG1-201ENST00000299440 TRIM41Q8WV44 630 aa10.99□□□□□ -0.65
RAG1-201ENST00000299440 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAG1-201ENST00000299440 ABCC9O60706 1549 aa10.88□□□□□ -0.67
RAG1-201ENST00000299440 PCGF6Q9BYE7 350 aa10.83□□□□□ -0.68
RAG1-201ENST00000299440 FBLN2P98095 1184 aa10.8□□□□□ -0.68
RAG1-201ENST00000299440 ITGAEP38570 1179 aa10.74□□□□□ -0.69
RAG1-201ENST00000299440 PELP1Q8IZL8 1130 aaKnown RBP10.72□□□□□ -0.69
RAG1-201ENST00000299440 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.7
RAG1-201ENST00000299440 POLR3GLQ9BT43 218 aa10.7□□□□□ -0.7
RAG1-201ENST00000299440 SLC4A1APQ9BWU0 796 aaKnown RBP10.68□□□□□ -0.7
RAG1-201ENST00000299440 CCER1Q8TC90 406 aaPredicted RBP10.66□□□□□ -0.7
RAG1-201ENST00000299440 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
RAG1-201ENST00000299440 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
RAG1-201ENST00000299440 BCANQ96GW7 911 aa10.56□□□□□ -0.72
RAG1-201ENST00000299440 ARID3CA6NKF2 412 aa10.5□□□□□ -0.73
RAG1-201ENST00000299440 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
RAG1-201ENST00000299440 FAM50AQ14320 339 aaKnown RBP10.42□□□□□ -0.74
RAG1-201ENST00000299440 TRIM52Q96A61 297 aa10.41□□□□□ -0.74
RAG1-201ENST00000299440 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
RAG1-201ENST00000299440 SLC24A1O60721 1099 aa10.39□□□□□ -0.75
RAG1-201ENST00000299440 ERICH6Q7L0X2 663 aa10.39□□□□□ -0.75
RAG1-201ENST00000299440 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
RAG1-201ENST00000299440 P3H3Q8IVL6 736 aa10.35□□□□□ -0.75
RAG1-201ENST00000299440 NEFLP07196 543 aa10.34□□□□□ -0.75
RAG1-201ENST00000299440 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
RAG1-201ENST00000299440 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
RAG1-201ENST00000299440 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
RAG1-201ENST00000299440 LOC105371045A0A1W2PR82 267 aa10.27□□□□□ -0.77
RAG1-201ENST00000299440 ZEB1P37275 1124 aaPredicted RBP10.27□□□□□ -0.77
RAG1-201ENST00000299440 CENPBP07199 599 aaPredicted RBP10.26□□□□□ -0.77
RAG1-201ENST00000299440 CHGAP10645 457 aaKnown RBP10.25□□□□□ -0.77
RAG1-201ENST00000299440 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
RAG1-201ENST00000299440 TRHP20396 242 aaPredicted RBP10.2□□□□□ -0.78
RAG1-201ENST00000299440 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
RAG1-201ENST00000299440 A0A0G2JS52 829 aa10.19□□□□□ -0.78
RAG1-201ENST00000299440 BCL11AQ9H165 835 aa10.18□□□□□ -0.78
RAG1-201ENST00000299440 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
RAG1-201ENST00000299440 CHMP7Q8WUX9 453 aaPredicted RBP10.16□□□□□ -0.78
RAG1-201ENST00000299440 CDK11AQ9UQ88 783 aaPredicted RBP10.15□□□□□ -0.79
RAG1-201ENST00000299440 SENP3Q9H4L4 574 aaPredicted RBP10.14□□□□□ -0.79
RAG1-201ENST00000299440 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
RAG1-201ENST00000299440 ARID4BQ4LE39 1312 aaPredicted RBP10.13□□□□□ -0.79
RAG1-201ENST00000299440 SCRIBQ14160 1630 aa10.13□□□□□ -0.79
RAG1-201ENST00000299440 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
RAG1-201ENST00000299440 NEFMP07197 916 aa10.09□□□□□ -0.79
RAG1-201ENST00000299440 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
RAG1-201ENST00000299440 C14orf37Q86TY3 774 aa10.09□□□□□ -0.79
RAG1-201ENST00000299440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
RAG1-201ENST00000299440 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
RAG1-201ENST00000299440 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
RAG1-201ENST00000299440 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
RAG1-201ENST00000299440 ERCC6Q03468 1493 aa10.03□□□□□ -0.8
RAG1-201ENST00000299440 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
RAG1-201ENST00000299440 PPP1R15AO75807 674 aaPredicted RBP9.99□□□□□ -0.81
RAG1-201ENST00000299440 CANXP27824 592 aaKnown RBP9.97□□□□□ -0.81
RAG1-201ENST00000299440 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
RAG1-201ENST00000299440 CHIC2Q9UKJ5 165 aa9.94□□□□□ -0.82
RAG1-201ENST00000299440 MYT1Q01538 1121 aa9.93□□□□□ -0.82
RAG1-201ENST00000299440 TSPY4P0CV99 314 aa9.91□□□□□ -0.82
RAG1-201ENST00000299440 TSPY10P0CW01 314 aa9.91□□□□□ -0.82
RAG1-201ENST00000299440 NPM2Q86SE8 214 aaKnown RBP9.91□□□□□ -0.82
RAG1-201ENST00000299440 MLECQ14165 292 aa9.89□□□□□ -0.83
RAG1-201ENST00000299440 ZNF316A6NFI3 1004 aaPredicted RBP9.88□□□□□ -0.83
RAG1-201ENST00000299440 LMOD2Q6P5Q4 547 aa9.88□□□□□ -0.83
RAG1-201ENST00000299440 AEBP2Q6ZN18 517 aaPredicted RBP9.88□□□□□ -0.83
RAG1-201ENST00000299440 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
RAG1-201ENST00000299440 PLEKHD1A6NEE1 506 aa9.84□□□□□ -0.83
RAG1-201ENST00000299440 RB1CC1Q8TDY2 1594 aa9.84□□□□□ -0.83
RAG1-201ENST00000299440 ARXQ96QS3 562 aa9.84□□□□□ -0.83
RAG1-201ENST00000299440 ANP32CO43423 234 aa9.83□□□□□ -0.84
RAG1-201ENST00000299440 HRCP23327 699 aa9.83□□□□□ -0.84
RAG1-201ENST00000299440 MTUS2Q5JR59 1369 aa9.78□□□□□ -0.84
RAG1-201ENST00000299440 NPHP1O15259 732 aa9.76□□□□□ -0.85
RAG1-201ENST00000299440 TMC1Q8TDI8 760 aa9.73□□□□□ -0.85
RAG1-201ENST00000299440 SALL2Q9Y467 1007 aaPredicted RBP9.73□□□□□ -0.85
RAG1-201ENST00000299440 RGL3Q3MIN7 710 aa9.73□□□□□ -0.85
RAG1-201ENST00000299440 TONSLQ96HA7 1378 aa9.72□□□□□ -0.85
RAG1-201ENST00000299440 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.85
RAG1-201ENST00000299440 BAZ1BQ9UIG0 1483 aaKnown RBP9.71□□□□□ -0.85
RAG1-201ENST00000299440 DIEXFQ68CQ4 756 aaKnown RBP9.71□□□□□ -0.86
RAG1-201ENST00000299440 PPM1GO15355 546 aaPredicted RBP9.7□□□□□ -0.86
RAG1-201ENST00000299440 CFDP1Q9UEE9 299 aaPredicted RBP9.69□□□□□ -0.86
RAG1-201ENST00000299440 POGKQ9P215 609 aa9.66□□□□□ -0.86
RAG1-201ENST00000299440 CCDC9Q9Y3X0 531 aaKnown RBP9.66□□□□□ -0.86
RAG1-201ENST00000299440 SOX12O15370 315 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms