RNA–Protein interactions for RNA: ENST00000434574.1

CDK7P1-201, Transcript of cyclin dependent kinase 7 pseudogene 1, humanhuman

BASIC

Gene CDK7P1, Length 693 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P1-201ENST00000434574 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
CDK7P1-201ENST00000434574 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
CDK7P1-201ENST00000434574 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
CDK7P1-201ENST00000434574 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
CDK7P1-201ENST00000434574 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
CDK7P1-201ENST00000434574 FOXD1Q16676 465 aa21.79■■□□□ 1.08
CDK7P1-201ENST00000434574 ADRA2BP18089 450 aa21.56■■□□□ 1.04
CDK7P1-201ENST00000434574 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
CDK7P1-201ENST00000434574 KCNA4P22459 653 aa20.87■□□□□ 0.93
CDK7P1-201ENST00000434574 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
CDK7P1-201ENST00000434574 MSH5O43196 834 aa20.52■□□□□ 0.88
CDK7P1-201ENST00000434574 PPP4R3CPQ6ZMV5 832 aa20.4■□□□□ 0.86
CDK7P1-201ENST00000434574 POTEDQ86YR6 584 aa20.4■□□□□ 0.86
CDK7P1-201ENST00000434574 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
CDK7P1-201ENST00000434574 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
CDK7P1-201ENST00000434574 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
CDK7P1-201ENST00000434574 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
CDK7P1-201ENST00000434574 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
CDK7P1-201ENST00000434574 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
CDK7P1-201ENST00000434574 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
CDK7P1-201ENST00000434574 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
CDK7P1-201ENST00000434574 ZBTB22O15209 634 aa19.24■□□□□ 0.67
CDK7P1-201ENST00000434574 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
CDK7P1-201ENST00000434574 RNF216Q9NWF9 866 aaPredicted RBP19.04■□□□□ 0.64
CDK7P1-201ENST00000434574 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
CDK7P1-201ENST00000434574 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
CDK7P1-201ENST00000434574 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
CDK7P1-201ENST00000434574 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
CDK7P1-201ENST00000434574 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
CDK7P1-201ENST00000434574 ATXN8OSP0DMR3 200 aa18.22■□□□□ 0.51
CDK7P1-201ENST00000434574 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CDK7P1-201ENST00000434574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDK7P1-201ENST00000434574 FKBP8Q14318 412 aa17.83■□□□□ 0.44
CDK7P1-201ENST00000434574 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
CDK7P1-201ENST00000434574 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
CDK7P1-201ENST00000434574 AMER1Q5JTC6 1135 aaPredicted RBP17.7■□□□□ 0.42
CDK7P1-201ENST00000434574 RTN4Q9NQC3 1192 aaKnown RBP17.7■□□□□ 0.42
CDK7P1-201ENST00000434574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.69■□□□□ 0.42
CDK7P1-201ENST00000434574 HNRNPUL2Q1KMD3 747 aaKnown RBP17.69■□□□□ 0.42
CDK7P1-201ENST00000434574 SAMD1Q6SPF0 538 aaPredicted RBP17.68■□□□□ 0.42
CDK7P1-201ENST00000434574 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
CDK7P1-201ENST00000434574 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
CDK7P1-201ENST00000434574 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
CDK7P1-201ENST00000434574 SLC24A1O60721 1099 aa17.33■□□□□ 0.36
CDK7P1-201ENST00000434574 APLP2Q06481 763 aa17.31■□□□□ 0.36
CDK7P1-201ENST00000434574 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
CDK7P1-201ENST00000434574 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
CDK7P1-201ENST00000434574 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
CDK7P1-201ENST00000434574 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
CDK7P1-201ENST00000434574 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
CDK7P1-201ENST00000434574 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
CDK7P1-201ENST00000434574 FBLN2P98095 1184 aa16.9■□□□□ 0.3
CDK7P1-201ENST00000434574 PROM2Q8N271 834 aa16.88■□□□□ 0.29
CDK7P1-201ENST00000434574 POLA2Q14181 598 aa16.86■□□□□ 0.29
CDK7P1-201ENST00000434574 CAPN15O75808 1086 aa16.81■□□□□ 0.28
CDK7P1-201ENST00000434574 VASPP50552 380 aaPredicted RBP16.71■□□□□ 0.27
CDK7P1-201ENST00000434574 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
CDK7P1-201ENST00000434574 ABCB7O75027 752 aa16.59■□□□□ 0.25
CDK7P1-201ENST00000434574 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
CDK7P1-201ENST00000434574 DSG3P32926 999 aa16.35■□□□□ 0.21
CDK7P1-201ENST00000434574 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
CDK7P1-201ENST00000434574 PKD2Q13563 968 aa16.33■□□□□ 0.2
CDK7P1-201ENST00000434574 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
CDK7P1-201ENST00000434574 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
CDK7P1-201ENST00000434574 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
CDK7P1-201ENST00000434574 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
CDK7P1-201ENST00000434574 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
CDK7P1-201ENST00000434574 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
CDK7P1-201ENST00000434574 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
CDK7P1-201ENST00000434574 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
CDK7P1-201ENST00000434574 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
CDK7P1-201ENST00000434574 SPOCK2Q92563 424 aa16.21■□□□□ 0.19
CDK7P1-201ENST00000434574 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDK7P1-201ENST00000434574 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
CDK7P1-201ENST00000434574 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
CDK7P1-201ENST00000434574 ECM2O94769 699 aaPredicted RBP16.07■□□□□ 0.16
CDK7P1-201ENST00000434574 MIER1Q8N108 512 aa16.03■□□□□ 0.16
CDK7P1-201ENST00000434574 POTEHQ6S545 545 aa15.95■□□□□ 0.14
CDK7P1-201ENST00000434574 BBXQ8WY36 941 aaPredicted RBP15.93■□□□□ 0.14
CDK7P1-201ENST00000434574 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDK7P1-201ENST00000434574 RGL2O15211 777 aa15.9■□□□□ 0.14
CDK7P1-201ENST00000434574 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.9■□□□□ 0.14
CDK7P1-201ENST00000434574 VSIG10Q8N0Z9 540 aa15.87■□□□□ 0.13
CDK7P1-201ENST00000434574 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
CDK7P1-201ENST00000434574 ZBTB47Q9UFB7 747 aaPredicted RBP15.85■□□□□ 0.13
CDK7P1-201ENST00000434574 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
CDK7P1-201ENST00000434574 PAXIP1Q6ZW49 1069 aaPredicted RBP15.8■□□□□ 0.12
CDK7P1-201ENST00000434574 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
CDK7P1-201ENST00000434574 BCANQ96GW7 911 aa15.74■□□□□ 0.11
CDK7P1-201ENST00000434574 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
CDK7P1-201ENST00000434574 KDM2AQ9Y2K7 1162 aa15.68■□□□□ 0.1
CDK7P1-201ENST00000434574 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
CDK7P1-201ENST00000434574 CHGAP10645 457 aaKnown RBP15.66■□□□□ 0.1
CDK7P1-201ENST00000434574 GSE1Q14687 1217 aa15.59■□□□□ 0.09
CDK7P1-201ENST00000434574 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
CDK7P1-201ENST00000434574 NUBP1P53384 320 aa15.56■□□□□ 0.08
CDK7P1-201ENST00000434574 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
CDK7P1-201ENST00000434574 TSHZ2Q9NRE2 1034 aa15.56■□□□□ 0.08
CDK7P1-201ENST00000434574 HS6ST3Q8IZP7 471 aa15.54■□□□□ 0.08
CDK7P1-201ENST00000434574 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms