Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AL365400.2-201ENST00000605604 902 ntBASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AL590560.2-201ENST00000608430 732 ntBASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AC097478.2-201ENST00000610572 514 ntBASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AC020910.4-201ENST00000612269 540 ntBASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
TRAIPQ9BWF2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AL353807.3-201ENST00000500626 2505 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC114324.1-201ENST00000504077 3152 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 RNU6-1263P-201ENST00000384601 106 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 MIR1272-201ENST00000408106 129 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 RN7SKP85-201ENST00000411349 318 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 OR10U1P-201ENST00000414690 905 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 PTP4A1P1-201ENST00000420539 515 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 HBBP1-201ENST00000433329 439 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC000041.1-201ENST00000439655 175 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC097499.1-201ENST00000444277 208 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC018892.2-201ENST00000457656 693 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 RN7SL740P-201ENST00000467060 344 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 ENPP7P3-201ENST00000509123 241 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC114801.1-201ENST00000512633 297 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 DNM1P33-201ENST00000565222 270 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 MIR4642-201ENST00000583943 82 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC012511.1-201ENST00000608140 449 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 MIR8075-201ENST00000614354 80 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 RPL36AP21-202ENST00000639134 430 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 HSPD1P1-201ENST00000503199 1726 ntBASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
TRAIPQ9BWF2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms