Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 EIF4A3P1-201ENST00000578499 647 ntBASIC7.62□□□□□ -1.19
RB1P06400 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.62□□□□□ -1.19
RB1P06400 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.62□□□□□ -1.19
RB1P06400 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.62□□□□□ -1.19
RB1P06400 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 AC011447.2-201ENST00000592921 283 ntBASIC7.62□□□□□ -1.19
RB1P06400 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.62□□□□□ -1.19
RB1P06400 AL591926.1-201ENST00000620542 217 ntBASIC7.62□□□□□ -1.19
RB1P06400 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.62□□□□□ -1.19
RB1P06400 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 AC110998.1-201ENST00000519029 2053 ntBASIC7.62□□□□□ -1.19
RB1P06400 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 AL137918.1-201ENST00000624542 1922 ntBASIC7.62□□□□□ -1.19
RB1P06400 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.62□□□□□ -1.19
RB1P06400 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 AC010894.1-201ENST00000313760 361 ntBASIC7.61□□□□□ -1.19
RB1P06400 RNU1-5P-201ENST00000362684 144 ntBASIC7.61□□□□□ -1.19
RB1P06400 RN7SKP171-201ENST00000364417 303 ntBASIC7.61□□□□□ -1.19
RB1P06400 RN7SKP130-201ENST00000364924 301 ntBASIC7.61□□□□□ -1.19
RB1P06400 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
RB1P06400 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 AC007365.2-201ENST00000428806 458 ntBASIC7.61□□□□□ -1.19
RB1P06400 AC104698.1-201ENST00000435671 276 ntBASIC7.61□□□□□ -1.19
RB1P06400 MYL6P3-201ENST00000436904 432 ntBASIC7.61□□□□□ -1.19
RB1P06400 NPM1P23-201ENST00000440193 849 ntBASIC7.61□□□□□ -1.19
RB1P06400 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 AL358876.1-201ENST00000453364 1075 ntBASIC7.61□□□□□ -1.19
RB1P06400 AL096803.1-201ENST00000456921 1021 ntBASIC7.61□□□□□ -1.19
RB1P06400 RPS26P11-201ENST00000463445 348 ntBASIC7.61□□□□□ -1.19
RB1P06400 RPS26P6-201ENST00000475156 348 ntBASIC7.61□□□□□ -1.19
RB1P06400 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.61□□□□□ -1.19
RB1P06400 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 RPL29P23-201ENST00000486188 442 ntBASIC7.61□□□□□ -1.19
RB1P06400 AC108120.1-201ENST00000506543 991 ntBASIC7.61□□□□□ -1.19
RB1P06400 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.61□□□□□ -1.19
RB1P06400 SCARNA6-201ENST00000515982 265 ntBASIC7.61□□□□□ -1.19
RB1P06400 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 IGKV3D-31-201ENST00000519131 281 ntBASIC7.61□□□□□ -1.19
RB1P06400 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.61□□□□□ -1.19
RB1P06400 AC098590.2-201ENST00000614787 281 ntBASIC7.61□□□□□ -1.19
RB1P06400 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
RB1P06400 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RB1P06400 AC217777.1-201ENST00000570034 1471 ntBASIC7.61□□□□□ -1.19
RB1P06400 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.61□□□□□ -1.19
RB1P06400 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.61□□□□□ -1.19
RB1P06400 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RB1P06400 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.6□□□□□ -1.19
RB1P06400 MARK2P4-201ENST00000503381 2380 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms